Coregonus clupeaformis (lake whitefish): 121572282
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Entry
121572282 CDS
T08357
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121572282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
121572282
NCBI-ProteinID:
XP_045072000
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MKSNHERSNECLPPKKRDFPASTADERPLVMAPASETQRGENLAWLASVAGGHNRDSSGG
NRDGGRAGQRTSTPSESDVTQYKPLYSTGTTHLDFLVPSSICSISSSSSSHQSSVVTTSL
PAMYTSPLSQSGGGIHYTQLPPNLQFISSPYTGPYAGYISSQLPPPPTSTSQCSYPNTAT
KLDQHHSVGPGRPPPQSQSLPPGLAVSDTGPQYIQLSGSSQSVDPRTAPSPHGGTHHMHP
DPHHTLAFSGSSQVLVQYACPGSEGPLTKREEGQPRELHNGELEKRSRFERKESKGTPSS
SSSSSSSSSHHQLHQQQSSQHHYETYTSHDASGLRTSLMPNSHGGQDHQSPNKLPPSSAS
HPEKSSLLLGKPVYRTSSSTSSTFTFPPQLNVESLKAAVSSPHTHTVIQTTHNASDASPP
SLGQLSTNFYQAGHGGQPIISYLSGGAGGQQYHTSLPQHLLIPGAPGSQPIIIPVSGAGV
TSLEATHAAHIATTTQPQPHAYATTTTNPNPKEEHLFEVPAPYPPLSHPAGAGGSVVQAQ
LHLPVVPPLPAPSSAPSGPSLPPYFIKGSIIQLADGELKRVEDLKTDDFIQSAEISSELK
IDSSTVERIDGSHTPNLAIVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLL
ELPCTKLSVGDVCISLTLKNLRNGSLKKTQQTQNQAMEITTSCNMGSIHGPLKPSRCSRG
GRGSGRHGEQENGVGHRGSSGSGGVVVGGVQIASENGELRFGVGGEANLKRGQPGDSESS
RGAAKPASRKRRWSAPEGRKVERSEEEPPLTLPKPSFITQEVKISIEGRSNIGK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccatgaacgcagcaacgagtgtctgccccccaagaagagagatttccca
gccagcactgcggatgagaggcccctggtgatggcgcccgccagcgagacccagcgagga
gagaacctggcatggctggccagcgtagccggcgggcacaacagagacagtagcggaggt
aacagggatggtggtagagctgggcagcgtaccagcactcccagtgagtctgacgtgacc
cagtacaaaccgctatactccaccggcaccacacacttagacttcctggtcccttcctcc
atctgttccatctcctcctcctcttcatcacatcagtccagtgtggtgaccacatccctc
cctgccatgtacacctctcctctgtcccaatcaggggggggcatccactatacccagctg
ccccccaacctccagttcatcagttccccttacacaggcccctatgctggctacatctcc
tcccagctcccccctccacccacctccacatcccaatgctcctaccccaacaccgccacc
aagctggaccagcaccactctgtgggtccaggtcgccccccaccccagtcccagtcccta
cccccgggcctggctgtgtcggacactggcccccagtacatccagctctctggttcctct
cagagtgtggacccccggactgccccctcgccccacggtgggacccaccacatgcacccc
gacccccaccacaccctggccttcagcggtagctcccaggtgctggtccagtatgcgtgc
cccggctccgaggggcccctgactaagagagaggagggccagcccagggagctgcacaat
ggagagctggagaagaggagccgctttgagagaaaggaaagcaaaggaaccccatcctca
tcctcctcctcttcctcctcttcctcccatcaccagctccaccagcagcagagctcccag
catcactatgagacctatacctcccatgatgcctcagggctacggacctctctcatgccc
aacagccacggaggacaagaccaccagagccccaacaaactacccccctcctctgcctcg
cacccagagaaaagcagccttctcctgggtaaacctgtgtaccgcacctcctcctccacc
tcctccacgttcaccttcccccctcagctcaatgtggagagtcttaaggcagccgtcagc
tccccccacacccacacggtcatccagaccacacacaacgccagcgatgcatcacccccc
tccctgggccaactctccaccaacttctaccaggctggccacggtgggcagcccatcatc
agctatctgtctgggggtgcaggggggcagcagtaccacaccagtcttccccagcacctt
ctcatcccaggggccccagggtctcaacctatcatcatccccgtcagtggggccggggtc
accagcctggaggctacccatgctgcccacatagccaccacaacccaaccacagccccac
gcctacgccaccaccaccactaaccccaaccccaaagaggagcatctattcgaggtcccg
gccccctaccctcctctgtcccaccctgccggggccggggggagcgtggtccaggcccag
ctacacctcccggtggtcccacccctcccggccccctcctctgccccctcaggcccctcg
ctgccaccctactttatcaagggctccatcatccagctggcggacggggagctgaagcgc
gtggaggacctgaagacggacgacttcatccagagcgctgagataagcagcgagctgaag
atagactcgtccactgtagaacgcatcgacggcagccacacacccaacttggcaatcgta
cagttctctgtgggtgagcaccgcgctcaggtgagtgtggaggtgctggtcgagtatccc
ttcttcgtattcggccagggctggtcatcgtgctgcccggaccggaccactcagctgtta
gaactaccctgcaccaagctgtcagtgggggacgtctgcatctccctcaccctgaagaac
ctgaggaacggctccctgaagaagacccagcagacccagaaccaggccatggagatcact
actagctgcaacatgggctccatccacgggcccctcaaaccctccaggtgttcccggggt
ggaagggggtcaggcaggcacggggagcaggagaacggggtgggccatagaggctccagt
ggaagtgggggagtggtggttggaggtgttcagatcgcctcagagaatggagaactgagg
ttcggcgtcgggggggaggccaacttgaaaagaggccagcctggagattcagaatccagc
aggggtgcagccaagccggcgagccgcaagaggaggtggtcggcccctgagggccgtaag
gtggagaggagcgaggaggagcccccgttgactctgcccaaaccttcctttatcactcag
gaggtaaagatcagcatcgaaggcaggtcaaatataggcaagtag
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