Coregonus clupeaformis (lake whitefish): 121572289
Help
Entry
121572289 CDS
T08357
Name
(RefSeq) rho family-interacting cell polarization regulator 2 isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121572289
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121572289
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121572289
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
121572289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HR1
HEAT_2
TPR_24
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
121572289
NCBI-ProteinID:
XP_041740244
LinkDB
All DBs
Position
29:63943120..64038157
Genome browser
AA seq
1109 aa
AA seq
DB search
MAMADIGEDQDYLNEVTREEMEDIFIYDGVSPLVPEIMASGTHSPGGPNGIIRSQSFAGF
STLQERRSRCNSFMGNSAVQKKPTSKPKKPHLSGHKGSSGSREPQPKRVEEVYGALKQGL
DEYLEVHQTGLDKLTSLMKDMKRNSRLGVLYDLDKQIKTIERYMRRLEFHMSKVDELYEA
FCIQHRLREGASKMKQAFSASPSTKATRESMSEVNRRYKEYTEDMSTLEGELENMLGEFH
IKMKGLAGFARLCPGDQYEIFMRYGRQRWKLKGKIEVNSRQSWDGEEMVFMPLITDLINI
KVTELKGLATHILVGSVICETKDLFTAMPQVVAVDVNDLGTIKLNLEVTWFPFDVEDLTL
SSGNVSKATALQRRVSVYSQGTPETPTFQDQSFFKWHPRPSPTQHRLSFLHGLRNSLLEK
LRRSRSFGDLASLRPRPKSSLEVYSTLPDDVFENGGCGNAECKRLSFTFSDTSVSSPSLA
PGQSNPEITVTPPETYPQSQIPNIEVTKEETVRIHADVVEEAEEGEEEEESSGSSGSVSA
SLVSEEAESEWERAESQCNGGSVSLCSQRQLSAVAPGGVFLDHTAPDRDEDEDDSSELLK
PVELDTEEPGSLTRQLVRRLTSSDILPEAGVLSWAGEGSRAFLESSLEETLQSLLLRLES
LGQRCRELQDLEQEVMRLEDLLKCRLPGHRSRSSSLSLMVESALESFDFLNTSDFDDDDT
GDDQALHRTVFFDMEAESIGPGSPHPEARGHLSEALTEDTGVGNSVAGSPLPLTTGNENL
DVAIVIHLQYCDHLIQLLSSGGSPWQRRAQLQKLSAQTQLLEELGEISTELMGSITSAAD
VLPGLAERPARMALWSECSGSGALFHTTLNRVLRHMRHSYTSPLQERHPHTAADTVIQLV
VSEMVDRSDLASTPPSALSQDVVTVFQFYSYVSEHSVEDMEEHLLQVAREAVFAEGLSGG
DSERCLKELEEMSHTGLCPRLQTLRALASLLSHEDPQLSKAAAAYITAAASHTPFRSKAV
DCYTQALWEAGVQTQRSACAALSCLQAVESIRAVVSLCDSADEELRHVAIETLLTFGEEG
RLAYEQLDTVPRELVRLGTRRGNAVTTAF
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggctatggccgacatcggagaggatcaagattatctcaatgaagtgacgcgcgaggag
atggaggacatcttcatctacgatggagtgtcacccctcgtcccagagatcatggcgtcc
ggaacccactcccccgggggacccaatgggatcatccggagccagtcctttgccggcttc
agcacgctacaggagagacgctcgcggtgtaactcgttcatggggaactctgcagtgcag
aagaagcccacgtccaaacccaagaagccccatctgtcaggtcacaagggcagcagcggc
tccagagagccccagcccaagagggtggaggaggtgtatggggccctcaaacaaggcttg
gatgagtatctggaggtgcaccagacagggctggacaaactcacctctttgatgaaggac
atgaagaggaactccagactgggagtcctgtatgaccttgacaagcaaatcaaaaccatc
gagaggtacatgaggcggttggagtttcatatgagcaaggtggatgagctgtatgaggcg
ttctgtatccagcacaggctgagggagggagccagtaagatgaagcaggccttctctgcc
tctccctccaccaaggccaccagagagagcatgtcagaggtcaaccgcagatacaaggag
tacacagaggatatgagcacgttagagggggagctggagaacatgttgggggagttccat
atcaaaatgaaaggtcttgctggctttgctcgtctctgtccaggagaccagtatgagatc
tttatgcggtatgggcgtcagcgctggaagctgaaggggaagatagaggtgaactccaga
cagagttgggacggagaggagatggttttcatgcccctcatcacagacctcatcaacatc
aaggtgacggagctgaagggcctggccactcacatcctggtgggtagtgtgatctgtgag
accaaggatctgttcaccgccatgcctcaggtggtggctgtagacgtcaacgacctggga
accatcaaactcaacctggaggtcacatggtttccattcgatgtggaagacctgaccctg
tcttcagggaacgtgagcaaggccaccgccctccagagacgggtgtctgtgtacagccag
ggcacgcctgagacacccaccttccaggaccagtccttctttaagtggcacccccgtccc
tccccgacccagcatcgcctgtccttcctccacggcctgaggaactccctgttagagaag
ctgagacgcagtcgctcctttggcgacctggcctccctccgccccaggcccaagtccagc
ctggaggtgtattccaccctccctgacgacgtctttgagaacggtgggtgtggcaatgcc
gagtgcaagcgactctccttcaccttctccgatacttcagtctcctcccccagcctcgcc
cccggccaatccaaccctgaaatcaccgtcacgccccctgagacctacccccagtcccaa
atccccaacattgaagtcaccaaggaagagactgttcgaatacatgcagacgtagtggaa
gaggcagaggagggtgaggaggaagaggagagtagcggtagcagcggcagcgtgagtgcc
agcctggtcagcgaggaggcagagtcagagtgggagagggcggagtcccagtgtaacgga
ggctccgtctctctctgctcgcagcggcagttgtctgcggtcgctcctgggggtgtgttt
ctggaccacactgcgccggacagggatgaagatgaggatgacagctcagagctgctgaag
cccgtagaacttgacactgaagaaccaggcagcttgaccaggcagctggtgaggaggctg
acatcgtctgacattctgcccgaggcgggggttctgagctgggctggggaggggagcagg
gccttcctggagagcagcctggaggagaccctgcagagtctgctactgaggctagagtca
ctgggacaacgctgtagagagctgcaggacctggaacaggaggtgatgcgcctggaggac
ctgctcaagtgccgcctcccgggccacaggagcaggtcgtccagcctcagcctgatggtt
gagagcgccctggagagctttgacttcctcaacacctccgacttcgacgacgatgacacg
ggtgatgaccaagccctccaccgcaccgtgttctttgacatggaggcggagagcatcggg
cctgggagcccgcacccagaggccaggggccacctgagtgaagccctgacggaggacacc
ggggtgggcaacagtgtggccggcagccccctgcctcttaccaccggcaatgagaacctg
gacgtggccatcgtcattcacctgcagtactgcgaccatctcatccagctcctgtccagt
ggggggagcccttggcagcgtcgagcccagctccagaagctctcagctcagactcagctg
ttagaggaactgggagagatcagcacagaactcatggggagcatcacctctgctgctgac
gtgctcccagggctggcggagcggcctgcccggatggctctgtggtcggagtgtagtggt
tctggagcgctgttccacactacgctgaacagggtgctcagacacatgcgccacagctac
accagcccactgcaggagagacaccctcacaccgcagctgacacagtgatccagctggtg
gtgagtgagatggtggacaggagtgatctggcctccacccctccatcggccctgtcccag
gacgtcgtcacggtgttccagttctacagctatgtctcagagcacagcgtggaagacatg
gaggaacacctactgcaggtggccagggaagctgtgtttgcagagggcctgagtggcggt
gactcggagcgttgtctaaaggaactagaagagatgtcacacaccggcctgtgtccccgg
ctgcagaccctcagggctctggcctcgctcctctcccacgaagacccccagctcagcaag
gctgcagctgcctacatcactgctgctgcctctcacacaccctttaggtcaaaggcagtg
gattgctacacacaggccttgtgggaggcgggagttcaaacacaaaggtctgcctgtgct
gctcttagctgtctacaggcagtagagagcatccgggcggtggtatcactgtgtgactcg
gcggacgaggagcttcgccacgttgccatagaaaccctgctcactttcggtgaggagggt
cgtctggcgtatgagcagctggacacggtacccagagagctggtacgactggggacacgg
cgagggaacgccgtcaccactgccttctga
DBGET
integrated database retrieval system
