KEGG   Coregonus clupeaformis (lake whitefish): 121572305
Entry
121572305         CDS       T08357                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121572305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121572305
Spliceosome [BR:cclu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121572305
 Complex B
    121572305
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 121572305
NCBI-ProteinID: XP_041740283
LinkDB
Position
30:complement(50168903..50179985)
AA seq 246 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGIRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRDLYGRRRKGKGGGGGGGGHRSRSRSRERRSRSRDRGRGGDGGRGGGRDREKRRSRDR
ERSGRF
NT seq 741 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcctccattttcggaacagagaaagacaaggtcaattgttcattc
tactttaaaattggagcatgccgacatggggaccgctgctctaggttgcacaacaagcca
actttcagccagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtatacgctgtgccgtcagcgacgtggagatgcaagagcactatgacgag
ttctttgaggaggtcttcacagagatggaggagaagtacggagaggtggaggagatgaac
gtgtgtgacaacctcggagaccatctggtcggcaacgtctatgtgaagttccggcgggaa
gaggatgcagagaaagcggtgatggacctgaacaaccgctggttcaacggtcagcctgtc
cactcagagctctccccggtcactgactttagggaagcctgctgtcggcagtatgagatg
ggagagtgcaccagaggaggcttctgtaacttcatgcacctgaaacccatctccagggaa
ctccgccgggacctgtatggacgccgtagaaaaggcaaagggggaggaggaggaggagga
ggacaccgctctcgctcgcgatcccgggaaaggcgttctcgctcccgggaccgtggccgt
ggtggcgatggcggcagagggggcggacgggaccgcgagaaacggaggtccagggaccgg
gaacgttctggaagattttaa

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