Coregonus clupeaformis (lake whitefish): 121572348
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Entry
121572348 CDS
T08357
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121572348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572348
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
121572348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
121572348
NCBI-ProteinID:
XP_045070898
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MLGGNGAGIGTRAGGARSGNGTGLNALQVNNPGTNMSGAEGGRFDDRIREYSAEVVYSGS
EPESDSGDDDETMGSAGDRRGVKRERAEMDVAASATSVGLPPGGYGGVTGGATGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSEGDGCTEA
TKPTFTMANLPASVNTQPTSTSSSSTSSSSSSVAMHLQNSIPATCWQVSAGVNTHSATSS
ANGTVLKTSATSTSVMLPGGFTLMSGTTLPPGMHTIPLSQLQALQGTLAQTSITTATAGH
TQQGQQTTLLRLPATVSLTGGGMGQQLQAIQVHPSSQQSSVSHSDLSHITSSSTVSLPTT
IVTSSVPSTMGGHMMYPGAHTVMYATPTTSLGDGSLTVLNTFPQTAHTQSHDPGAVSQVF
LTGHPGTVQIPVSAVQIHPMVIGQQSSSSSNLTELQVVNLDAHHHSKDD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtggaaacggggcaggaataggtacaagagcagggggcgcgcgatctggaaat
gggactgggttgaatgctcttcaagttaataacccaggaacgaacatgagtggtgctgaa
ggtggaaggtttgacgaccgaatcagagaatactcagccgaggtggtgtacagcggctct
gaaccagagtccgactccggggatgatgacgagaccatgggttcagccggggacagaaga
ggggtgaaacgggagagagctgagatggatgtcgctgcatcggcgacgtcggtggggcta
cccccgggaggttatggcggtgtcacgggaggtgcaactggggcaaaaccaggcaagaaa
acccgcggacgagtcaagatcaaaatggaatttatagacaacaaacttcggcggtacaca
acttttagcaagaggaagactggcattatgaagaaggcctacgagctctccactctaacg
ggcacccaggtcctcctcctggtggccagcgagacaggccacgtctacacctttgccacg
cgcaagctccagcccatgatcaccagcgagacgggcaaggcgctcatccagacgtgcctc
aactcgcccgactcgccaccccgcaacgacccgtccaccgaccagcgcatgagcgccaca
ggcttcgaggagacggacctcacctaccaggtgtcggagggtgacggctgcacggaggcc
accaagccgacgttcaccatggccaatctgcctgccagtgtcaacacccaacccacgtcg
acgtcctcgtcctccacttcctcctcctcctcctccgtggccatgcacttgcagaacagc
atccctgccacctgctggcaggtctcggcgggcgtcaatactcacagtgccaccagcagt
gccaacggcacggtgctgaagacctcggccacgtcaacgagtgtcatgctacccggaggg
ttcaccctcatgtccggcacaacgcttccccctggcatgcacaccattccgctcagtcag
ctgcaggccctccagggcaccttggcccagaccagcatcaccaccgctaccgcagggcac
acacagcagggccagcagaccaccctgctccgcctacccgcaactgtctcgctcacaggt
ggagggatgggccagcagctgcaggccattcaggttcaccccagcagccagcagagctct
gtgagccacagtgacctctcccacatcacaagcagctccacagtgagcctccccaccacc
atcgtcacgtcctcggtgccctcgacgatgggtggtcacatgatgtaccctggcgcccac
actgttatgtacgccacacctacgacctcgttgggcgacggcagtctgaccgtgctcaac
accttcccacagacagcccatactcagtcccatgaccccggtgctgtatcgcaggtgttc
ctcacaggacatcctgggacagttcagatccctgtgtcagcagtgcagatccacccgatg
gtgattggtcagcagtcaagcagcagcagcaatctcacagagcttcaagtggtcaacctg
gacgcccatcatcactcaaaggacgattga
DBGET
integrated database retrieval system
