KEGG   Coregonus clupeaformis (lake whitefish): 121572390
Entry
121572390         CDS       T08357                                 
Name
(RefSeq) striatin isoform X1
  KO
K17608  striatin 1/3/4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121572390
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     121572390
SSDB
Motif
Pfam: WD40 Striatin WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT140_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 121572390
NCBI-ProteinID: XP_041740381
LinkDB
Position
8:complement(65661878..65727896)
AA seq 784 aa
MDEQAGPGVFFNNNNNSGLPGAGKGPQQPGDVGGGEAAKAHYNIPGILHFLQHEWARFEV
DRAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERSKYHKLKYGTEL
NQGDMKPPSYDDSDEGNENEVPSPPNSSQLGWKQGRQLLRQYLQEVGYTDTILDVKSQRV
RALLGLAGDSGERPSDRKPEPMVNGTEPSLLKDSGMISKPDMSDSATVLEAFKFIESAAA
EFSDEEDDEDSEGRDKTIMNLATMVRKKTSSSPSSSSDMSDDLDTEEALKGFDFLASPDE
MDGSPDTRSAEDSGDWEKEEQCPMPEAWDVDQGLIAQLKEQYRKERKGKKGVKRPNRSKL
QDMLANLRDAEDLPSMQPPVTPPSRPSVPRLNEHEVGRPEEVEAMTFPPTSGKSFIMGPD
EAAESELGLGELAGLTVANEADSLAYDVTNSQDALRKTWNPKFTLRSHFDSIRGLAFHPV
EPVLVTASEDHTLKLWNLQKTAPAKKCAALDVEPIYTFRAHRGAVLCVTMSSTGEQCFSG
GVDGTIQSWNTPNPNIDPYDSYEPSVLRGAMLGHTDSVWGVVYSSAHQRLLSCSGDGTVR
LWNAANTSPALAIFNEKGELGVPTSVDLVCSEPAHMVTSFSTGEIGLFNMETRQLILKLD
QTGEPEAPCKINKVLSHPTLPITITAQEDRHIQFFDNNTGKCIHSMVAHLDAVTCLAVDP
NGLYLMSGSHDCSIRLWNMESKTCIQEFTAHRKKSDEAIHDVAFHPTKCYIGSAGADALA
KVFV
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggacgaacaggcagggcccggcgtgttctttaacaacaacaacaactcgggtttgcct
ggcgctggcaaaggaccgcagcagccaggcgacgtcggtggcggagaggcggccaaggct
cattacaacattccgggcatattgcactttctgcaacacgaatgggcccgcttcgaggtg
gatagagcgcaatgggaggtggagcgagccgaattgcaggcccagatagccttcctgcag
ggcgagaggaagggccaggagaacctgaagaaggacctggtcaggaggatcaagatgctg
gagtatgccctcaaacaggagaggtcaaaataccacaagctcaaatacggaacagagttg
aaccaaggagacatgaaacctcccagctacgatgattccgatgaagggaatgaaaacgag
gtcccgagcccccccaacagtagtcagctgggttggaaacagggacggcagctactcaga
cagtaccttcaggaggtgggctacacggacaccatcttggatgtgaagtcccagagagtc
agggcactgctgggcctggctggagattctggagagaggccgtctgacaggaaaccggaa
cccatggtcaacggcaccgagccatctttgctgaaggacagcggcatgatcagtaaacct
gacatgtctgactcggccactgtccttgaggccttcaagttcatagaaagcgccgccgcc
gagtttagcgacgaggaggacgacgaagacagcgaagggagggacaagaccattatgaac
ttggccactatggtgcggaagaagacgtcttcgtccccctcctcatcctcggacatgagt
gacgacctggacacggaggaggccctgaagggctttgacttcctggctagcccagatgag
atggacggctcgcccgatacccggagcgccgaagacagcggagactgggagaaggaagag
cagtgccccatgcccgaggcctgggacgtggaccagggcctcatagcccaactcaaggag
cagtacaggaaggagcgcaagggcaaaaagggggtgaagagacctaaccggtccaaactg
caggatatgctggccaacctgcgagacgcagaggacctcccatccatgcagccccccgtc
acaccgccctcccggcccagcgtccccaggctcaacgagcacgaagtgggccgccccgaa
gaagtggaggccatgacgtttccgcctacgtcagggaagtcgttcatcatggggccggac
gaggcggcagagagcgagctgggcctgggcgagctggcgggcctcactgtggctaacgag
gcagacagcctggcctacgacgtgaccaacagccaggatgcgctgcggaagacgtggaac
cccaagttcacactgcggagccactttgactccatccggggcctggccttccaccccgtg
gagcccgtcctggtcactgcctccgaggaccacaccctcaaactgtggaacctccagaag
accgcccccgccaagaaatgtgctgctctagatgtggaacccatctatacattcagggcc
catcggggtgcggtgttgtgtgtgaccatgagctctacaggggagcagtgcttcagtggg
ggggtggatggaaccattcagagctggaacacccccaaccctaatatcgacccctatgac
tcatatgagccctcggtgctgcggggggcgatgctgggtcacactgactcagtgtggggt
gtggtctacagctcggcccaccagcgcctgctctcctgctccggggacggcactgtgcgc
ctgtggaacgctgccaacacctcccccgcactcgccatcttcaacgagaaaggagagctg
ggcgtccccacgtcagtggacctggtgtgcagtgagccggcccacatggtgacgtcgttc
agcacgggggagatcggactcttcaacatggagacgcggcagctgattctcaagctggac
cagaccggagagcccgaagccccgtgcaagatcaacaaggtgctgagtcaccccactctg
cccataaccatcacggcccaggaggaccgacacatccagttcttcgacaacaacacgggg
aaatgtattcactccatggtggcccacctggacgcagtcacctgtttagctgtggatccc
aacggcttgtacctgatgtctggcagccacgactgctccatccgcctgtggaacatggag
agcaagacatgcatccaggagttcacagcgcaccgcaagaagtcggacgaggccattcac
gacgtggcgttccatcccaccaagtgctacatcggcagcgccggggccgacgcgcttgcc
aaggtcttcgtatga

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