Coregonus clupeaformis (lake whitefish): 121572415
Help
Entry
121572415 CDS
T08357
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121572415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121572415
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121572415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
C1_2
SOS1_NGEF_PH
Prok-RING_1
PHD
CM_2
Motif
Other DBs
NCBI-GeneID:
121572415
NCBI-ProteinID:
XP_045073775
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMNGCPPQYQQRSVSMEGFDTEDMEQVLLGALEGSSRGGWDPRRAPIPSYGQELGSLLSL
TEEEAGCQTQLFSPLEEQSSQLQGFSASAPSLCASPSLRQLPNANLHPPTQAHTHTHSQT
PHTHPYTHSQNHQHQSHHRSYSNSTSQRYYQESSLGSVFGGSTQSVDAELGELWGQEERE
RLDGERERRREERRTEEQRGAPPGEERGEKTGSPLGRTFSFLRKMAGQRKNKEKERMKER
EKEAREREARYSNGHLFTSLTVSATTLCSACNKSITAKEALSCPTCNVTIHNRCRDTLAN
CAKMKQRQQKLALVRNSSALQNVALRTKTPMMKERPSSAIYPSDSLRQSLLGSRRVRSGL
SLSKSVSTQNLAGNLNDDSPLGLRRILSQSTDSLNFRNRAMSMESLNDEGEVYYAAMLEE
LEREGKDFEADSWSRAVDPSYLQTHRKDVIKRQDVIYELIQTEFHHVRTLRIMEGVFRQG
MLDEVLLEPGVAHAVFPCLEQLMALHTRFLSQLMTRRTHSLAPGSCTNFTINQLGDILTE
QFSGQCADEMRKAYAEFCSRHPKAVKLYKELLARDKRFQHFIRRVSRGPLLRRHGIQECI
LLVTQRITKYPVLIQRILDNTKGSEEEAKSLAQSLSLIRDLLSSVDQQVAELERTQRLQE
IRARLDPRAQAEVRGGGVFRGGELLRRTLLHEGTLLWKTQGSRLKDVQVLLMTDILVFMQ
EKDQKYFFPCIDKPAVLSLKNLIVRDIANQERGMFLISDSTPPEMYELHGTSRDDRNNWM
RLIQQTVSSCPSREDFPLIETEDKALLRRLRADIQQKDREVLELLQERVTLFSDLAEVTG
GGQEVMPLTNSRNIFRADTPYAPQAEYLLTDAISEVDRLSELLLGSNIELPKSNGSTNGD
QNHKGAPVSNGDSISVNGTHEFKGSPASKDRNGNQLQDRPLNEEVCQRLVNLNAQLHALQ
AAVIHQDSVLELRLREGTGPASSGSSTPTPTPPNSFPRLCRSMSRDTGLDAGTVATMGDM
AMLQRQHVLLQEEVGRLRPLEARLRESEKAQAQMEQQLRDMKGRRGSRGSRGSRGSNGDI
VVDVTALEQAPAKRRGSGDGEPSPVAPLACQEPVDQLDGVQEGSEEEEEEDSEEEEDVVK
VSPRSDSPRDLQDIPEESECGPEAQESKADSEIVPS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatggctgccccccgcagtaccagcaacgcagtgtgagtatggagggttttgac
acagaagatatggagcaggtgctccttggggccctggaggggtccagcagaggggggtgg
gaccctcgccgagcccccatcccttcctatggccaggagttgggctccctgctgtcactc
acagaggaggaggcaggctgccagacccagctcttctccccattggaggagcagtcgtct
cagctgcagggcttcagtgcctccgctccctccctgtgtgccagtcccagtctgcgccag
ctacccaacgccaacctccaccctccaacccaggcacacactcatacacactctcagaca
cctcacacacacccctacacacactcacaaaaccaccagcatcagtctcatcatcgctcc
tactccaattccacctcccaacgttactaccaagagtcttccctgggctctgtatttggg
ggttccacacagagtgtggatgcggagcttggtgagctgtgggggcaagaagagagggag
cggctagacggagagagagagaggcggagggaggagagaaggacggaggaacagaggggt
gctccccccggggaggagaggggggagaagacaggaagccctctggggcgcaccttcagc
ttcctgcgcaagatggccggccagcgcaagaacaaagagaaggagcggatgaaggagagg
gagaaggaggcgcgggagcgggaggcgcgttacagcaacggccacctcttcacttccctc
accgtgtctgccaccaccctctgttctgcctgcaacaagagcatcaccgctaaagaggcc
ctcagctgccccacctgcaatgtcaccatccacaaccgctgtcgagacacactggccaac
tgtgccaagatgaaacaaaggcaacagaagctagccctggtgaggaacagctccgcgctg
cagaacgtggctctaaggaccaaaacccctatgatgaaggagcgacccagctcagccatc
tatccgtccgacagtctccgtcagtccctgctgggctcccgccgtgtccgctccggcctc
tccctctccaagagtgtctccacacagaacctcgcagggaatctgaatgacgactcacca
ttggggctgcggaggatcctgtctcagtccacagactccctgaacttcagaaacagagcc
atgtccatggagtccctcaacgacgagggggaggtgtactatgctgccatgttggaggag
ctggagagggaggggaaggactttgaggctgactcgtggagtcgggctgtagatccctcc
tacctgcagacccaccgcaaagacgtcatcaagagacaggacgtcatctatgagctgatc
cagacagagttccaccacgtgaggaccctgcggatcatggagggggtgttccggcagggc
atgctggacgaggtgctgctggagccgggcgtggcgcacgccgtcttcccctgtctggag
cagctgatggcgctacacacacgtttcctttcccagcttatgacacgacgcactcacagc
ctggctcctgggagctgtactaactttactatcaaccaactgggggatatactcactgaa
cagttctcaggccagtgtgcagatgagatgaggaaggcctatgctgagttctgcagccgc
caccccaaagctgtgaaactgtacaaggaactgctggccagagacaagaggtttcagcac
ttcatacggagggtaagccgggggcccctactgcgtcgccatggcatccaggagtgcatc
ctgctggtgactcaacgcatcaccaaataccctgtcctcatccagcgcatcctggacaac
accaagggcagtgaagaggaggccaagtccctagcccagtccctgtccctgatccgggac
ttgttgagctctgtggaccagcaggtggcagagctggagcggacccagaggctccaggag
atcagggccagattggacccccgggcccaggcagaggtcaggggaggaggggtgttcagg
ggaggggagctgctccgcaggacgctcctccacgagggcacactgctgtggaagacacaa
ggatccagactcaaagatgtgcaggtcctgctgatgacagacatcctggtgttcatgcag
gagaaggaccagaagtatttcttcccctgcatagacaagcctgcagtgttgtctctgaag
aacctgattgtgagggacatagccaatcaggagcgagggatgttcctgatcagtgactcc
acccccccagagatgtacgagctgcacggcacctcacgagacgacaggaacaactggatg
agactcatacagcagaccgtcagcagctgtccgtccagagaggacttccccctgatagag
acagaggacaaggctttactgcgcagactcagagctgacatccagcagaaggacagggag
gtgctggagctcctccaggagagagtgactctgttctctgacctggctgaggtcaccggt
gggggtcaggaggtcatgcccctcaccaactctaggaacatcttccgggccgacaccccc
tatgcaccccaggcggaatacctactcaccgacgccatctcagaggttgacaggctgagt
gagttgctgctgggttctaacattgagcttcccaagtccaacggtagcaccaatggtgac
cagaaccacaaaggggcgccagtgagcaatggagattcgatctccgtcaacggaactcat
gaattcaaaggaagtccagcgtccaaggacagaaatggtaaccagctacaggacagaccc
ctaaatgaggaggtgtgtcagaggctggtgaacctcaatgctcagctccacgctctacag
gccgccgtcattcaccaggactctgtcctcgagctccgcctccgtgagggtactggccct
gcctcctcaggttcctccactcccacccccactcctccaaactccttccccaggctgtgc
cgttccatgtcacgtgacacaggtctggatgcgggcacggtggcaaccatgggggacatg
gccatgctccagaggcagcatgttctgctgcaggaggaggtggggaggctgcgccccctg
gaggccaggctgagggagagcgagaaggcccaggctcagatggagcagcagctcagggac
atgaagggcaggaggggaagcagaggcagcagaggcagcagaggcagtaacggagacatc
gtggtggatgttacagccttagagcaggctcctgctaaaagaagaggaagtggtgatggc
gagcccagccctgtcgccccattggcctgtcaggaaccagtggaccaattggacggcgta
caggaaggcagtgaggaggaggaagaggaggactcagaggaagaggaagatgtagtgaag
gtttcaccacgctccgacagtccaagagatctccaggatatcccggaggagagcgagtgc
ggaccggaagcgcaggaatccaaggctgattccgagattgttccgagttaa
DBGET
integrated database retrieval system
