Coregonus clupeaformis (lake whitefish): 121572429
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Entry
121572429 CDS
T08357
Name
(RefSeq) transcriptional repressor p66-beta isoform X1
KO
K23194
transcriptional repressor p66
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121572429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572429
03036 Chromosome and associated proteins [BR:
cclu03036
]
121572429
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121572429
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
121572429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
DUF7573
Motif
Other DBs
NCBI-GeneID:
121572429
NCBI-ProteinID:
XP_045070701
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MERLNEEAVRLSLLKRGLDSSSPAGSATSSERDELLSKRIKMEGHQAMERLKMLAYLKRK
DLAGMEGGGLGGVSGGGGGEVKGHGSSGGGAYEEKTNGSLRGQVVGAHGIVGKSGKENMG
EEPVDFSARRGDVDRERHTPSPDVIVLSDNEASSPRGPSQGEERLRAANLEMYKGKTGEE
RQKMIRALREELRLEEARLVLLKKLRQSQMQKENLVQKVPVVQNTASALQSGAIHGAQSM
SKMSGRPGHHTPEPQNHRTAQGHSVIRSATNSSMSQMMMSQSRVIAPNPAQLQGQRLAQQ
KQGGMRSSTGSSNNAVSYQQSSTQQVAASLRSGSSSSSAIYMNLTHMQAAGAAGGVSGVS
GVGAVSPSATHSPGGTSVGSSMADTASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFL
PSAANSEFIYMVGLEEVVQSVIDSQGKLRLPSSMEPFSCAQCKTDFTPHWKQEKGGRILC
ETCMSSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRIQLQAALATSSAQTVPSVSKAES
MSRHHTHRQAPQPQVTQSQASLQRGLSGSARGVLSNFAQASQLSVASSLLGMTGKRSGQQ
GTSGHSRAQQQQQQQQQHHDNRRQLYSIPGVNIAYLNPSNVGGHKGSSMADRQREYLLDM
IPPRSISQSISGQK
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagcgactgaatgaggaggcggtgcggctgagcctgctgaagcgaggcttggactcc
tcctcgcctgcaggcagtgccactagcagtgagcgagacgagctgctctccaaacgcatc
aagatggagggccaccaggccatggagcgcctcaagatgctggcctatctgaaacgcaag
gacctcgctggcatggaggggggagggttgggaggggtctcaggaggcgggggtggtgag
gtcaagggtcatgggtcttcagggggaggggcctatgaggagaagaccaatgggagcctc
cgtggtcaagttgtgggagcccatggcatagtgggaaagagcgggaaggagaacatgggc
gaggagccggtggatttcagcgcccggagaggtgacgtggacagggagcgacacacaccc
tcccctgatgtgatcgtcctgtcagacaatgaggcgtccagtccaagagggcccagccaa
ggggaggaacgcctgagggcagcgaacctggagatgtataagggtaagacaggggaggag
aggcagaagatgatcagggctctgagagaggagctgaggctggaggaggccaggctggtg
ctgctgaagaagctgaggcagagccagatgcagaaggagaacctggtgcagaaggtccct
gtggtccagaacacagcatctgccctccagagcggtgccatccacggtgctcagagcatg
agcaagatgtctggccgccctggccaccacaccccagagccccagaaccatcgcactgca
cagggtcactcagtgatcaggtcagccaccaacagctccatgtctcagatgatgatgtca
cagagcagggtgatagcgcccaaccctgcccagctgcagggtcagaggctggcacagcag
aagcagggtggcatgcgctcctcaactggcagctctaacaacgccgttagctaccagcag
tcttccacccagcaggtggcagcttctctgcgctctggctcctcctcctcctcggccatc
tacatgaacctgacccacatgcaggcggccggagccgcgggaggggtcagtggggtgtcg
ggggtgggggcggtcagcccctcagccacacacagcccaggggggacatcggtgggctcc
tccatggcagacacagccagcagccaggcggccgccaagctggccctgaggaagcagctg
gagaaaaccctgctggagatcccgcctcccaagccgccggcgccactcctccacttcctg
ccgtcagcggccaacagcgagtttatctacatggtgggcctggaggaggttgtgcagagt
gtcattgacagtcagggtaaactgcgtttgccctcctccatggagcccttctcgtgtgcc
cagtgcaagacggacttcacccctcactggaagcaggagaagggtgggcgcatactctgc
gagacctgtatgtcgtccaatcagaagaaggcactgaaggccgagcacaccaataggctg
aagaacgccttcgtcaaggctttacagcaggagcaggagattgagcagagaatccagttg
caagccgctcttgccaccagttcagctcaaactgttccaagcgtcagtaaggctgagtct
atgagcagacatcacacacacagacaggcgcctcagccccaggtgacccagtcccaggcc
tccctccaacggggtctgtccggctcggcccgaggcgtcctgtccaactttgcccaggcc
tcccagctctctgtggccagcagcctgctgggcatgactggaaagcgcagtggacagcag
ggcactagtgggcacagccgggcacagcaacagcagcaacagcagcaacagcatcacgac
aaccgccgccagctctacagcatccctggggtgaacatcgcctacctgaacccaagcaac
gtgggcggccacaaggggtccagcatggctgaccgccagagggagtacctgctggacatg
atcccgcctcgctccatatcccagtccatcagcggacagaaatga
DBGET
integrated database retrieval system
