Coregonus clupeaformis (lake whitefish): 121572450
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Entry
121572450 CDS
T08357
Name
(RefSeq) semaphorin-4F
KO
K06521
semaphorin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121572450
CD molecules [BR:
cclu04090
]
Proteins
121572450
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GFIT
Motif
Pfam:
Sema
Sema4F_C
PSI
Motif
Other DBs
NCBI-GeneID:
121572450
NCBI-ProteinID:
XP_041740457
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Position
8:20958331..21047602
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AA seq
853 aa
AA seq
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MRASGVVIFWLLWVLCPISGSWTATLSTIGDLDAMLGPQQFRGVANFSTFLLDRSSGVLF
LGARDAILAVDTNNLAKQPRTIVWDVPEEKKRSCVAKGKTEGDCNNYIRLLEFLGDGQIY
ACGTYAFDPQCAFLNMSSFSLERWEDGRVRMETGKGKCPFEPSQHYTAVMADGILYTAAT
SNFLGTLFDISRATGQEQERIRTERSINWLSDPEFVSSAFIQQDEDTNPTGDDNKIYFFF
TEVAKEYDLYTKVKVPRVARVCKSDVGGMKTLQRRWTTFVKAQLVCENRASGQRYNILTD
VYTTQHTSGDPSSTHFYGLFTSQWEHEELSAVCVYSLADISKVMDGPFKELKKTCENWIN
PEPVPTPRPGQCLNSALRAKGFESSLKLPDKVLTFMRDHPLMENSVIAAPLLVRRGITYT
KVAVTRTTTGSDDDQSNAATVLHLGTDRGELHRVAVVGQNTTLLQEISLFTAQEPVNNIL
LHKGQALVGTQLSLARVGAEGCSLYSSCEECARARPLGCVWRVKEGACSPSMTGPIQGEE
VEDALRLCESGEGRCSPAQRVLLVSVGLRVLLPCVQVSPHPCTWVHPPHRHTRQHHSDLE
VTVTAESLGTYTCLCQEGASGGKEESPPCSRASYQLTLEGPSTGGAVALAGGRHILVVYI
LCFSLGVTLGGFLLYVLSRRRGISQRHPDHSLSSEKGRDLLDSSATPQSPSSASLLSEGF
PLTEKRMGNGTLLLTHHHNNGNSHHGNYGGGSGYGGNRGNAGYANTDPLNTPVMSATSTV
AEGLKLHVQETVADEKRGGDRERGRPEGGEGGGEGDEEDEGLGEGLGGLEEELAGFVLFK
LPAPLAQCEESSI
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgtctggcgtggtgatcttctggcttctctgggtgttatgtcctatctctgga
tcttggacggccactctgagcactattggtgatttggacgccatgttggggccgcagcag
ttcaggggcgtggccaactttagcacctttctattggaccgttcatctggggttcttttc
ctgggtgcgagagacgccatactggctgtggatacaaacaacctggcaaagcaaccacgc
acgatcgtgtgggatgttcctgaggagaagaagaggtcctgtgtggctaaaggaaagaca
gagggtgactgtaataactacatccgcctgctggagtttctgggagacgggcagatctac
gcctgtggcacctatgctttcgacccgcagtgtgccttcctgaacatgtcttcattctct
ctggagcgatgggaggatggaagggtgaggatggagacagggaaagggaaatgtcccttt
gagcccagccagcactatacagctgtcatggcagatggtatcctgtacactgccgccacc
agtaactttctgggaacgctgttcgatatctcccgggccaccggtcaggagcaggaacgg
atccgcaccgagagatctattaactggctcagtgacccagagtttgtgtcctcagcattc
atacagcaggatgaagacaccaacccaacaggagacgacaacaagatctatttcttcttt
accgaggtcgccaaggagtatgacctctacactaaggtcaaagttcccagggtcgcacgc
gtttgcaagtctgatgtaggtggtatgaagacattgcagagacgttggaccaccttcgtc
aaggctcagttggtgtgtgagaacagagccagcggacaacgctacaacatactgacagat
gtctacacaacccaacacacatctggcgatccaagctctacgcacttttatgggctcttt
acttctcagtgggagcatgaggagttgtcagcggtttgtgtgtacagtctggctgacatc
agcaaagtgatggacggacctttcaaagaactgaagaagacctgtgagaattggatcaac
ccagaacccgtacctacacccagaccaggacagtgtctaaacagtgctctgagagcgaag
ggcttcgaatcttctctcaaactgcctgacaaggtgttgacgtttatgagagaccaccct
ctgatggagaacagtgtgatcgcagcgcccctactggtgaggaggggaatcacatacact
aaagtagctgttaccaggacgaccacagggtcggatgacgaccagagcaacgcagccacc
gtgttgcacctcggcacagaccgtggggagctccatagagtagcggtggtaggacagaac
actaccttactacaggagatctctctcttcactgcacaggaacctgtcaacaacatactg
ctgcacaagggccaggctctggtgggtacccaactgtccctggcccgtgtgggggcggag
gggtgcagcctatactcttcctgtgaggagtgtgcccgggcgagacccctggggtgtgtg
tggagggtcaaagagggagcttgcagtcccagcatgacaggtcctatccagggagaggag
gtagaggatgctctgaggctgtgtgaaagtggagaaggtcgttgctcccctgcccagagg
gtactgcttgtctcagtgggtctccgtgtccttctcccctgtgtccaggtgtcaccacat
ccctgtacctgggtacacccaccacacagacacacccgtcagcaccactctgacctggaa
gtcaccgtcacagcggagagcctggggacatacacctgtctgtgtcaggagggtgcttca
gggggtaaagaggagagtcctccctgtagtagagcctcctaccagctcaccctggagggc
ccaagcaccgggggggctgtggcgttggccggagggcgccacatactggtcgtctacatc
ctctgcttcagcctgggtgtcaccctcggaggcttcctcctttacgtcctgtcccgccgc
cgcgggattagccagcgccaccctgaccattccctctcctcggagaagggacgggacttg
cttgactcctcggcgacgcctcaatctcctagcagcgccagtttgttgtccgagggtttc
ccgctaacggagaagagaatggggaacggtacgctgctcctcacacaccaccacaataac
ggcaacagtcaccatggcaactacggcggcggcagtggctacggcggtaaccgtggcaac
gcgggctacgctaacaccgatccattaaacacgccggtgatgtcagcgacgtcgaccgtg
gcggaggggctaaagcttcacgttcaggagactgtggcggacgagaagagggggggagat
agggaaagggggaggccggagggaggagagggaggaggagagggggatgaggaggacgag
gggctaggggaggggttggggggactggaggaggagctagcagggtttgtgttgtttaag
ttaccagcaccattagcccagtgtgaggagagttctatctga
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