Coregonus clupeaformis (lake whitefish): 121572474
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Entry
121572474 CDS
T08357
Symbol
efna3a
Name
(RefSeq) ephrin-A3 isoform X1
KO
K05462
ephrin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121572474 (efna3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121572474 (efna3a)
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121572474 (efna3a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121572474 (efna3a)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121572474 (efna3a)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121572474 (efna3a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121572474 (efna3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121572474
NCBI-ProteinID:
XP_045077826
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All DBs
Position
8:complement(27896106..27982236)
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AA seq
226 aa
AA seq
DB search
MALATVSLCLIALAFTNLHLTRANDRHAVYWNSSNLHLRREGYTVQVAVNDYLDIYCPHY
NSTATSQRGTLERTVAEQYVLYMVSYRGYRTCDPQIGFKRWECNRPHAPHAPIKFSEKFQ
RYSAFSLGYEFNVGHEYYYISTPTHHHGHSCLRLRVYVCCSTVSHGDDSSQTPPDYTVRP
NIKIHNIDEFNPEIPKLEKSVSGSSPSRDRLLLTVATLLISALLVS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgcaaccgtttctctctgtctaatagcacttgcctttacaaacttgcacctg
acgcgagccaacgaccgacatgccgtctattggaacagctcaaatttacatctacggagg
gagggctacacggtgcaggtggcagtgaacgactacctggacatctactgcccgcactac
aacagtaccgccaccagccagcgggggacactggagcgcaccgtggctgagcagtacgtc
ctctacatggtcagctaccgcggctaccgcacctgcgacccccagattggcttcaagcgc
tgggagtgcaaccggccgcatgcgccccacgcgcccatcaagttctctgagaagttccag
cgctacagcgccttctccctgggctacgagttcaacgtgggccacgagtactactacata
tccacgcccacccatcaccatggccacagctgcctgagactgagagtctacgtctgctgc
tccacggtctcccacggtgatgattccagtcagacaccacctgactacacagtcaggccc
aatatcaaaatacacaacattgatgaatttaaccctgaaattcccaaactggagaagagc
gtcagcggcagcagcccatcacgcgatcgccttctgctcaccgtggcaacactgctcatc
tccgccctcctggtctcctag
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