Coregonus clupeaformis (lake whitefish): 121572486
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Entry
121572486 CDS
T08357
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572486
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121572486
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Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-met
zf-C2H2_15
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
121572486
NCBI-ProteinID:
XP_045077804
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Position
8:23585033..23599644
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AA seq
713 aa
AA seq
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MKLETAPDMSEWREDDFALNCTYIVPDQMLDPSFGVPKAMTSIPRNLTFEYSTENEVTGV
FSKEYIPQGTRFGPLQGEIYTKDNVPKQANRKYFWRIYNGGQQHHFIDGYDLQRSNWMRY
VNPAHSLSEQNLVACQNGPDVYFYTIKPVEPRQELLVWYSQEFAQRLCSQPGDELKQKHV
SRDVRESEFTKQQQTWLLEEKEEMKDESEDEREERIDVEVLERDTPPDTPDDQIMDFSQK
IENEKVTQDHQGPIPSPQPDQREPNLGSHVYGFPERHPTAPFPHRNLPLHLHGLYGHREG
LVSSYPLYHPSRPLQTPYQLIPPYSSPHYPHLLLPQYSPPFPGMLPSRDPLRYSSYLSSD
GLPYPSMAHQPGLLPVSLPYPGATQGGLKERTPNMSPPCGAPATPELSPLPKQEHQTPLQ
SPCGCEEAMNLSLAMPKSSPSPPAAPGYKSLPYPLKKQNGKIKYECNVCIKTFGQLSNLK
VHLRVHSGEKPFQCHLCKKSFSQLAHLQKHHLVHTGEKPHECTVCHKRFSSTSNLKTHLR
LHSGEKPYQCKLCSTKFTQYIHLKLHRRLHCTRDRTYHCPLCARAFLHRFSLCVHQRSCC
PASSQAHANPHSHAHIRELVERFDTSPEADTLSEGAGPAHVEAAVERWVARSMEGRECKE
DQSEATLLLKALTAAINTPAPPITSSHSSTSAYQERASVVHLYNRPMVKMQGQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggagacagccccagatatgagtgagtggcgagaggacgactttgccctcaac
tgcacctacatcgtccctgaccagatgttggaccccagcttcggtgtgcccaaagccatg
acgtccataccccgcaacctcacctttgagtacagcacagagaatgaggtgacaggcgtg
ttcagcaaagagtacattcctcaggggactcggttcgggcctctgcagggtgaaatctac
accaaagacaacgtccccaaacaggccaacaggaaatacttctggaggatctataacggc
gggcagcaacaccacttcatcgacggctatgacttgcagcgcagcaactggatgcgctac
gtcaacccggcgcactcgctgtccgaacagaacctggtggcgtgccagaatggacccgac
gtctacttctacaccatcaagcccgtggagcccaggcaggagctgctggtgtggtacagc
caagagttcgcccagagactgtgcagccaaccaggagacgagctcaaacaaaaacacgta
agcagagatgtcagagaatccgagttcaccaaacaacagcagacctggctcctggaagag
aaggaggagatgaaagacgagagtgaggatgaaagggaggagagaattgacgtggaggtg
ctggaaagagacactccacccgacacgccagacgaccaaatcatggacttcagccagaag
atagagaatgagaaggtgacccaggaccaccagggacccatcccctctcctcaacctgac
cagagagagcccaacctgggatctcatgtctacggcttccctgagcgccaccctactgcc
cccttcccgcaccgcaacctccccctccacctccacggactctacggccacagagagggc
ctagtgtcctcctaccccctctaccacccctccagaccccttcaaaccccctaccagctt
atccccccatacagcagcccccactacccccatctcctcctcccccagtactccccaccc
ttccctgggatgctcccctccagagaccctctgcggtacagcagctacctgagtagcgat
ggacttccatacccctccatggcccaccagcctggtctgctcccagtgtctttgccctac
cccggagctactcagggagggctgaaggagaggaccccaaatatgtcacctccttgtggg
gccccagccaccccagagctctctccccttcccaagcaggagcaccagacgcccctgcag
tcaccctgtggctgtgaggaggccatgaacctcagcctggccatgccaaagagcagcccc
tcgccacctgctgcccctgggtacaaatccctaccctaccccctgaagaaacagaacggc
aagatcaagtacgaatgcaacgtctgcatcaagactttcggacagctgtccaacctcaag
gtgcatctgagagttcacagtggagagaagcccttccaatgtcacctctgcaagaagagc
ttcagccagctagcccacctgcagaagcaccacctggtccacacaggagagaaaccacac
gagtgcacagtgtgtcacaagcgcttcagcagcaccagcaacctcaagacccacctgcgg
ctccactcgggtgagaagccctaccagtgcaagctgtgcagcaccaagtttacccagtac
atccacctcaagttgcaccgacgcctgcactgcacccgcgaccgcacctaccactgcccg
ctctgcgcccgcgccttcctccatcgcttctcgctgtgtgtccaccaacgcagctgctgc
cctgcttcctcccaggcccacgccaacccccattcccacgcccacatccgcgagctggtc
gagcgcttcgacaccagccccgaggcggacactctgtctgaaggggcagggccagcccat
gtagaagctgcagtggagcgctgggtggcccggagcatggaagggcgagagtgcaaggag
gaccagagtgaagccaccctgctgctcaaggccctcacggcggccattaacaccccagct
cctcccatcacgtcatctcacagctctacttcagcctatcaggagcgggctagtgtggta
cacctctacaaccggccaatggtgaagatgcaagggcagtag
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