Coregonus clupeaformis (lake whitefish): 121572496 Help Entry 121572496         CDS       T08357                                  Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cclu03000]     121572496 Transcription factors [BR:cclu03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     121572496 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF4819 HMG_box HMG_box_2 Zf_WRKY19 Motif Other DBs NCBI-GeneID:  121572496 NCBI-ProteinID:  XP_045077847 LinkDB All DBs Position 8:29990995..30030151 Genome browser AA seq 2567 aa AA seqDB search MKTIKKQGRRSPPSTRAKGGKRRGAGDSGEKRDSDENRDRSPKSQTSPQTSSHAESSQEE SVTLTARVTPEREGHREGPRLPETAAAAAGTLPGKSEDSRPGSVKSLNAHSTDSSSSAAS AANSPNPSSNRKTATFKARVPKKKYTSEHCAAAAAAASNHGNHGNPSTPPLNSSSAHCGS NAGSQSSGLSSGPGSTASEGGSLTDINSQTRRPAEDYTTTIAPSQDRDSTPGPPPTGDRD RRGPEGGRDISPSPVRCSSTDTASEHDLDVSEPRRPNLHHTNPTTEAHTLTLVQRSTQHT PTPQSLSDALADALAKGLKNQRVLARQARRRSGKGEEENGRGGGRESMDSVFRAGVVRQV SGEHGSLEVQLNGEKELYCYPFREGAQGPVDIIMDAPPPGSQAVPIGTPVCVPFGGNEDG GTTEAQRQWYREGLVTQVDSHPAVSYPYRVLLEDRAPPGDEEGDGRVGTPTAVWVSRQSL RLLVPPWDLDLGPSGGGREEGNAAAERGREREREREDRDRDEIEVEQELCRLSQGMGLSA AVPGSVLGRLSYPGTAPASSSSSTVSSPVTPATVLSLVPGREWEREKDLVERERELQRKQ ERDNRERAKQHHHFMPLTPEEDIEVSHFSMVPMGATGGAAKALAVSQHRHILSKPGYLSP HLSVGRGLGGTPLVGPHLALNPHPPPSPTVLLGLESGALGGAVIATPLRPPLPSSSSRGS LDKPPSSNANSHGASGGGGGSGSAFSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQ WRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRDRGGASSTGTLTPSDLRMGGGR TSSEFDWDNTSRDSSEASSRGGDSRPRLVLPSLLPQDLSRFDFDECEAATMLVSLSSSRS GTPSFSPISNQSPFSPTPSPSPSPLLSFRPATFSPITAPSSLTPRRHRHLSGTKMGTPGS DRERHLSGILPTFQTNLTFTVPMSPSKRKLDAHPPPLPLSAQDYAKPGQQLGETIGLRPA AFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSATPPSPLPQDPSPRRIV PLRDSPVIVRNPDVPLAKFTEGPLGRRGGGGHSSREHSQPLHLATGLQAPVPINGAATNG AVLLRNHASTLVLVTSSQSLTPAVAGRPVHCSPAPSGGSASISSTGSALSSSGSGGREWE RKPGGHQDTIEGTLPQPVACHPSPTALLPLILPAESPQPAPRKDIIMGRPGTVWTNVEPR SVPVFPWHSLVPFLEPSQSSAAAQPADGQQLVNQSKEPRCGVALVSDGRVGPPDAGRGSP SRPPPSSNDNNPPAERAERGGADSETESDADDPFFPDVVNDPALSTGPLIKRRTQSLSAL PKDGDRKREKDHIRRPMNAFMIFSKRHRTLVHQRHPNQDNRTVSKILGEWWYALGPKEKQ KYHDLAFQVKEAHFRAHPDWKWCNKDRRKSISEGRGTPGAKEARERSMSESTEPESVSQG MEVKGAAGLGWPAGSERHLGAYSGQLPRPRAFSQSAVHSLERRERARDLEKLCRDGAGSF HSRPPTLSLAQCGASEDGTSDEERMVICEEEGDDDVMDDSCPEGSIDLKCKERVTDSDED EPDGQRAFQPVARSSLPSSTSTSHSDSYSDSTKGNTGGSSGESSERKRKRGMEGGEEGSG ESKRGRGGGGQVSSNSIPGSAPNTSTPALGYGLTQVLSAVRMAPTMVTNMVCPITSTPIP IASKPMALSALPGEKKATLLIGGPGAGGGPFKAGGGYLSSSSPNPVSVGPGGLQVTSLVL GGAFPNQSIQLIAPPQPLLSSTHSTLPLPLPLLQPQFLPAASLTPPGAAKPGLTQVQYIL PTLSSVSANPKSPSPQLTQQPTGVRTLPSTPPTHVSLANGIHSGSGVGIRYAAVGGVSPG ERVQAQSPVLQSKMLVPMATVRTSSTPPQPSSLVAPPLPMQNGALPGNKIIQIAPMPMVQ TNVHSAGAVHPGSPFPVSMATATVMTPGITPTQTVLLTSPPTRITYVQSGTGVVSTATVQ APPSPGPAYLPSCLTTLGFTAIAPAGQALVHPLVAGQPPLLAPALSAGAPGTGRQLLTTI YPAQSITLAPDVVSMTSVPPNLAQEVSGQSSPLAVGVQGSKDVTRSHEEGMPHLTAEMEH KPQVEGQALRKTKTQIKKGSIKKEKMTEDVEVHSEPGANSMGTSSSNIPTGSVENGGRAS HVKEENTDDARDYAKEKQTDVDGEREMGIKKESGTPEPEGSRETDDWPHEGHNKGDSGNG GHSKEAGPREPPHPPTGLDTLPPPPQTDRNAPPSAKKTKFRPPPLKKTSDSIDKVLSGSY FEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRRNSTDLDSSAEDPSSPRRKT AARSRLSSCSSEPNTPKSDVMCEGDIFTFDRAGAESEDVLGEMDRVPYSSLRRTLDQRRA LVMQLFQEHGFFPSAQATAAFQALYSDTFPTKMCLQLKIREVRQKIMQTATPGTPGISEP GGSTTGVLGSTDSTSTGSSNTNARDGAGTEPGERGRSPEEPRSLGKL NT seq 7704 nt NT seq  +upstreamnt  +downstreamnt atgaagacgattaaaaagcaaggaaggcgctcgcccccgtcgacccgggccaaagggggg aagagacggggggcgggggacagtggggagaaaagagactcagacgagaacagagacaga tcccccaaaagtcagacctcaccccaaacctcatctcacgcagagtcttctcaggaagag tctgtgacactcacggcgagggttacgccagagagggagggccacagagaggggccccgg ctcccagagacagcggccgcagcagcagggaccctccctgggaagtcagaggactcccgc ccggggagcgtcaagtcgctgaatgcccacagcacagacagcagcagcagcgccgccagt gctgccaacagccccaacccctcgtccaaccgcaagacggccacattcaaggcccgcgtc cccaagaagaagtacacttctgagcactgtgctgccgccgctgctgccgccagcaaccac ggaaaccatggcaaccccagcacgcccccactgaacagcagtagtgctcactgtggcagt aacgccggtagtcagtcgtcaggcttatcttcggggcccgggtcgacagcgagtgaaggc ggttcgcttactgacatcaacagtcagaccaggagaccagcggaggactacactaccact atagctccatcacaggacagggacagcacacctggaccccctcccacaggggacagagac aggagaggcccagagggaggcagagacatctcccccagccctgtccgctgctcctctaca gacacagccagcgaacacgacctggacgtgagcgagccacgccgccccaaccttcaccac accaaccccaccaccgaagcacacaccctgaccctggtgcaacgtagcacccaacacact ccgaccccacagagcctgtctgacgcgctagccgacgccctggccaaaggtctaaagaac cagcgggtgctagccaggcaggctaggaggaggagcggaaagggggaagaggagaacgga agaggaggggggagggagagcatggactcagtgttcagagcgggcgtggtgcggcaggtg agcggcgagcacggcagcctggaggtgcagctgaatggcgagaaggagctgtactgctac ccattccgtgagggcgcccaggggcccgtggacatcatcatggacgccccgccgcccggc tcccaggccgtgcccatcggcacccctgtgtgcgtgcccttcggaggcaacgaggacggc ggcaccacagaggcccagcgccagtggtaccgagagggcctggtcacccaggtggactcc cacccagctgtgtcctacccctatagagtgttgttagaggacagagcgcccccaggggat gaggagggggatggcagggtgggcactccgacggctgtgtgggtgtcccgtcagagcctc cgcctactggtgcccccctgggacctggacctgggaccctccggaggggggcgagaggag ggcaatgctgccgctgagagagggagagagagggagagagagagagaggacagggacagg gacgaaatagaggtggagcaggagctgtgtcgcctcagccaggggatggggctcagcgca gctgtgcctgggtccgtgttggggaggctttcataccctggaacggcccccgcctcctcg tcttcctccactgtcagctcccccgtcactcccgccacggtgctgagtctggtgcccgga agagaatgggagcgagagaaggacctggtggagagagagagggagctccagaggaaacaa gagagagataaccgagagagggccaagcagcaccaccatttcatgcccctgacccccgag gaggacatagaggtgtcccacttcagcatggtgcccatgggggcaacggggggggcagcc aaggccctggcggtgtcccagcacaggcacatactctctaagccgggctacctcagcccc cacctgtccgtgggtcggggcctcggaggcaccccgctggtgggcccccacctggccctc aacccccacccccctccctcccccacagtgctactgggcctggagtcgggagctctgggg ggagccgtcatcgccacccctctgcgcccccctctgccctcctcgtcctcccgcggctcc ctggataagccaccctcgtcaaacgccaactcccacggtgcatctggagggggtggaggt tcgggttcggcgttctcgtcgcgctcccgcaccccgctcacggcagcccagcagaagtac aagaagggcgacgtggtgtgtacccccacgggcatccgcaagaagttcaacggcaagcag tggaggaggctgtgctccagagagggctgctctaaggagtcccagagaagaggctactgc tcacgtcatctttccatgagaactaaagagatggaggccagcggagggggcagagaccgt ggcggtgccagcagtacgggcaccctaaccccgtcagacctgaggatgggcggcggccgg accagttcggagttcgactgggacaacacgtcgcgagacagcagcgaagcgagcagtagg ggaggggattcacgcccccgcctggtcctgccctcgctcctgccccaggacctatcacgc ttcgactttgatgagtgcgaggcggccaccatgctggtgtctctgagcagctcccgctcg ggcactccctctttctctcccatctccaaccagtcgcccttctcgcccacgccgtcgccc tcgccatccccgctcctcagcttccgcccggccaccttcagccccatcacggccccgtct tctctcacccctcgccgccaccgccacctgagcggcactaagatgggcacgccgggctcg gaccgcgagcgccacctgtcgggcatcctgcccaccttccagaccaacctcaccttcacc gtgcccatgagccccagcaagcggaaactggatgcccatcctccgcccctgcccctctct gcccaggattacgccaagcccggccagcagttaggggagactataggccttaggccagcc gccttcagggtgctctcccctcagagccagcccaccaccccctcctccctctccttcccc cggccccggagcgctaccagccgccccccgtcctccgccgcctccacccccccgcccatg ctggtgtccgccacccctccctccccactgccccaggaccccagcccccgccgcatcgtg cccctgcgagactcccccgtcatcgtgcggaaccctgacgtccccctggccaagtttacc gagggacccctagggaggaggggaggagggggccactcctccagagagcacagccagccc ctgcaccttgccaccggcctccaagcacccgtgcccatcaacggcgccgccaccaatgga gcggtcctcctgcgaaaccacgcctccaccctggtccttgtaacctcctcccagtccctg accccagccgtcgccggacgccctgtccactgcagcccagcccccagtggtggctccgcc tccatctcctctactggctccgccctctccagctctggatcaggcggtagggagtgggag aggaagcccggtgggcatcaggacaccattgaagggacactgccccagccggtagcctgc cacccttcgcccactgccctgctgcccctcatcctaccagctgagtcccctcaacctgca ccccgcaaggacatcatcatgggacggcctgggacagtatggaccaatgtggagccacgg tcagtgccagtgtttccttggcattcattggtccctttcctggagcccagccaatcgagt gcggctgcccagcccgctgatggccaacagcttgtcaatcagagcaaagagcctcgttgt ggggtggccctagtgagtgacggacgggtgggcccaccagacgcaggacgtgggtctcca tcccgcccaccaccctcctccaatgacaacaaccccccagctgaaagagcagaaagaggc ggagccgacagtgagacggagagcgatgcagatgacccgttctttccggatgtagtcaat gatcctgccctgtctacaggcccccttatcaagaggcgcactcagtccctcagcgctctt ccaaaagatggagacagaaagagggaaaaggaccacattcggcggccaatgaacgcgttc atgatcttcagcaagcgtcaccggacgctggtgcaccagaggcaccccaaccaggacaac cgcacggtcagcaagatcctgggcgagtggtggtacgccctggggcccaaagagaagcag aagtaccacgacctcgccttccaggtgaaggaggctcacttcagggcccacccagactgg aagtggtgcaacaaggacaggaggaagtctatctctgagggccgagggaccccaggggcc aaagaggcacgcgagaggagcatgtcggagagcacagagcctgagtcagtgtctcagggc atggaggtgaagggtgcggcaggcctgggctggcctgcgggctctgagcgtcatttgggg gcctacagtggtcagctccctcgcccccgggccttctcccagagtgcagtgcacagcctg gagaggagggagcgggccagagatctggagaagttgtgtcgagacggggcaggctcgttc cacagccgcccccctactctctccctggcacaatgtggggccagcgaggacgggaccagc gacgaggagcgcatggttatctgtgaggaagagggggacgatgatgtcatggatgactca tgccctgagggatccatagacctcaagtgtaaagagagagtgactgacagtgacgaggat gagccggatggacagcgagccttccagccagtggcccgttcctctctcccctcctccacc agcacctcccactccgactcttactccgactctaccaaggggaacacaggggggagctct ggagagagctctgagaggaagagaaaacgagggatggagggaggagaagagggaagtgga gaatccaaaagaggaaggggtggaggggggcaggtttcctctaattccatccctggatcg gcgcccaacacctcgacccctgctctgggttatggactcacccaggtgctcagtgcagtc cggatggcccccaccatggtgaccaacatggtatgccccatcaccagcacgcccatcccc atcgccagcaagccaatggccctcagtgccctccctggggagaagaaagccacgcttctg attggaggaccgggagcaggaggcgggcctttcaaagcagggggtgggtacttgtcttcg tcctctcccaatcccgtgagtgtggggccgggggggctgcaggtcaccagtctagtgctg ggaggagctttccccaaccagtctatacagctcatagccccgcctcagcctctcttaagc tccacccacagcaccctgccactccccctccccctgctgcagccccagttccttcctgcc gcctctctcaccccccctggcgctgccaagcctggcctcacccaggtgcagtacatcctg cccaccctgtcttctgtcagcgccaaccccaagagcccctccccccagctaacccagcag ccaaccggcgtccgcacgctgccctccactccgcccacacatgtctccctggccaatgga atacattcggggtcaggagtgggaataagatatgccgcagtgggaggggtcagccctgga gaaagagtccaagcccagtctccagtcttgcagagcaagatgttggttcccatggcaaca gtgagaaccagctctactcctcctcagcccagctccctggtggctcctccccttcctatg caaaatggtgctctaccaggaaacaagattatccagattgcccccatgccgatggtccag acaaatgtccactctgctggagcagtgcatcctgggagtcccttccctgtatccatggca acagccactgtgatgactccgggcatcacacccactcagaccgtgttgctgacctcgcct ccaactaggatcacttatgtccaatcaggcaccggagtggtctccacggcaacagtccag gcccctccttctccaggccccgcctacctgccatcgtgcctgacgaccctgggcttcacc gccatcgcccctgccggccaagccctggtgcaccctctcgtagcgggccaaccgcccttg ctagccccagccctttccgctggagccccagggaccggacgtcaactcctcaccaccatt tacccggcccagagcatcaccctggcgccagatgtggtttccatgacctccgtgcccccc aatttggctcaagaagtgtccggccaatcatcacccttggctgtcggtgtccagggttca aaggacgtgacccggtcacatgaagagggaatgccacacctgactgcagagatggagcac aagccacaggtggagggccaggccctaaggaagaccaagactcagataaagaaagggagc ataaagaaagagaagatgacagaggatgtcgaggtacatagcgaacccggtgctaactca atgggtacgtccagcagtaatataccaacagggagtgtagaaaatggtggtcgagccagc cacgtgaaagaagagaacacggacgatgccagagattatgccaaagagaaacagacagac gtggatggagagagggagatggggataaagaaggagagtgggacgcctgaaccagagggg tccagggagacagatgattggccccatgagggccacaacaaaggggacagtggcaacggg ggccacagcaaagaggctggaccgagggaacctccccaccctcccacaggactggacact cttccacctcccccacagacagacaggaacgcgcccccctcagccaagaagaccaaattc cgccccccgccactcaaaaagacctccgactccattgacaaggtcctgtcggggtcctat ttcgaggagcgctttgccgagctgccagagttcaggccagaagaggtgctgccctctccc accctccagagtctggccacctccccccgagccatactgggaagctaccgcaagaagagg aggaactctacagacctggactcgtctgcagaggaccccagctctcccaggaggaagact gcagctcggagccgtctctccagctgcagctcggagcccaacacacccaagagcgacgtc atgtgtgagggggacatcttcaccttcgacagagctggtgctgagtctgaggatgtcttg ggggagatggacagagtgccgtactcctctctccggaggactctggaccagcgcagggct ctcgtcatgcagctcttccaggaacacgggttcttcccttcagcccaggccactgcagcc ttccaggcgctctactcagacacctttcccaccaagatgtgtctgcagctgaagatcagg gaagtgaggcagaagatcatgcagacagccacacctggaacccccggaatctctgagccc ggcgggtcaacaacaggggtcctgggctcaacagactccacctccactggctcctcaaat actaacgctcgagatggtgcagggacggagcccggagaaagagggcggagtcccgaggag cccaggagtttgggcaaattgtag

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