Coregonus clupeaformis (lake whitefish): 121572572
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Entry
121572572 CDS
T08357
Name
(RefSeq) DNA-binding protein SATB1-like
KO
K23225
DNA-binding protein SATB1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572572
03036 Chromosome and associated proteins [BR:
cclu03036
]
121572572
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
121572572
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121572572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ULD
CUTL
CUT
RSC4_Ig_like
Motif
Other DBs
NCBI-GeneID:
121572572
NCBI-ProteinID:
XP_045078193
LinkDB
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Position
8:complement(41607423..41655306)
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AA seq
852 aa
AA seq
DB search
MSGAYGLGVSVMDPQQCDGGHVSEGCDSPGNGDSWPPPAKLSRLELNAGEGPPGPHQGRT
RQGSPGARAPTLAPKPMTHATQPKNWHKRGSLLPVLCVVEHRESPVSAVEAERREEHAEF
VLVRRDLLFNQLIEMVLLALGYSHSSAAQAKGLIQVGRWNPVPLSCVTDAPDATVADMLQ
DLYHVTTLKIQLTSCPRLEELPPAQWSHSTVRNALKELLRDMNQSSLAKECPLSQSMISS
IVNSTYYANVSATKCHEFGRWYKHFRKTKGIMEIDSFSDQSQPGSTHLTFTHQPIPGSTA
EQADSSPLLFPHGGAAHISGRGCLAPSLCPTGLVTAPLSPQLVTPQQIVMAQFLNQQYAV
SRMLAQQSLSVSVSTSPQQFLNHPPVGRPPPSLALAKAPDPQPQAGPPGPGSGSQSQVCG
PSDISCEIYQWVREELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKSASQSLLVNLR
SMQSFLQLTEGVRDRIYQEERERSLTVSTTINHSPNNTTPPRPTQTRKEEGNFVKAEDWH
SRVSIGIPIARLSPVAIAVINRGVKSEGCVLNINSSIYEEIQQEMKRAKVSQAMFAKMAA
SKSQGWLCELLRWKEDPSPENRTLWENLCMIRRFLSLAQTERDAIYEQESNALQQHCTDR
LTQLVNDNTLLQHHSPLPQQHHQRLLTPLSQQPLQPQAGPRLPPRQPSTASPAETEGGGG
QLRTWLGGSKDDGRGEDITGRGSRSRAGGSNDKEGGEGGWSGARQSNGEGVGGCNGEGGE
GLRVSREAQGILQSFIQEVGLNPDEEAVHTLSAQLGLPKHTILSFFHCHPHSYTHQYHRQ
DYNKPSSVVSLS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgcgtacgggctgggtgttagtgtgatggacccccaacagtgtgatggaggc
catgtgtcagagggctgtgactcacctggtaatggggattcctggcccccacctgccaaa
ctgtcccgcctggagctgaacgctggcgagggacccccagggccacaccagggcaggacg
agacaagggagcccaggggccagagcccccaccctggcccccaaacccatgacacacgca
acacaacccaagaactggcataagagagggagcctgctgcctgtgctgtgtgtggtagag
cacagagagagcccggtctcggcagtggaggctgagaggcgagaggagcatgcagagttt
gtactggttaggagagacctgctgtttaaccagctgatagagatggttctactggccctg
ggctactctcacagctcagcagcacaggcaaaaggtttgatccaggtgggtaggtggaac
cctgtccctctgtcctgtgtgactgatgctcctgatgccactgtggctgacatgctgcag
gacctctaccatgtcaccaccctcaagatccagctcaccagttgtcccaggttggaggaa
ctccctccagcacagtggagtcactctacagtgagaaacgccctgaaggagctactgaga
gacatgaaccagagctcactggccaaagagtgccctctgtcccagagtatgatctcctcc
attgtgaacagcacctactatgcaaacgtgtcggccaccaagtgccacgagtttggccgc
tggtataagcacttcaggaagaccaaaggcatcatggagattgatagcttctctgaccaa
tctcaaccgggctccacccatctgacctttactcatcaaccaatcccaggcagcacagcc
gaacaggccgactcctcgcccctcctcttccctcacgggggagccgcccacatttctggc
cgtggctgtctggccccaagtctctgccccacagggctggtgaccgcccccctcagcccc
cagctagtcaccccccaacagatagtcatggcccagttcctcaaccagcagtatgcagtt
agccgtatgctagcccagcagagcctgtctgtatctgtctccacctccccccagcagttc
ctcaaccacccccctgtggggaggcctcccccctccctggccctagccaaggcccccgac
ccccagccccaggctggaccaccaggacccgggtctgggtcccagagccaggtgtgtgga
ccatcagacatctcatgtgagatctaccagtgggtgagagaggagctgaagagagcaggt
atctcccaggctgtgttcgcccgcgtggcctttaacaggacccagggcctgctgtctgag
atcctgcgtaaggaggaggatcctaaaagtgcgtctcagtctctcctggtcaacctgcgg
tccatgcagagtttcctccagctaactgagggcgtccgagaccgcatctaccaggaggag
agagagaggagtctgaccgtgtcgaccactatcaaccattcacccaacaacactacccca
ccacgccccacacagaccagaaaggaagagggaaactttgtcaaggctgaagattggcac
tcccgggtttccataggcatccctatagcgaggctgtccccagtagcaatagcagtaata
aacagaggggtgaagagcgagggatgtgttctaaatatcaacagttctatctatgaggag
atccaacaggagatgaagagagccaaggtgtctcaggccatgttcgccaagatggccgcc
tccaagagtcagggctggctgtgtgagctgctgcgctggaaggaggatccgtccccggag
aaccggaccctgtgggagaacctatgtatgatcaggcgcttcctgagtctggcccagacg
gaacgagatgccatctacgaacaggagagcaacgctctgcagcaacactgtacagacaga
ctcacacagctagtcaacgacaacacactgctccaacaccactccccgttgccacagcaa
caccatcaacgactcctgacccctctgtcccagcagcccttgcagccccaggcggggcct
cgcctgcctccacggcaaccgtccacagcatcaccagccgagactgaggggggtgggggc
caactgaggacctggttggggggtagtaaggatgatgggaggggagaggacattactggc
cggggcagtaggagtagggctgggggtagtaatgacaaggaggggggtgagggaggttgg
tcgggggccagacagagtaacggggagggcgttggtgggtgtaatggtgaggggggggag
gggttgcgggtgtcccgggaggcgcaggggatcctgcagagcttcatccaggaagtgggt
ctgaacccagacgaggaggctgtccacaccctgtcagctcagctgggcctgcccaaacac
accatcctcagcttcttccactgccacccccacagctacactcaccagtaccatagacag
gactacaataagccttcatctgtcgtgagtctaagctga
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