Coregonus clupeaformis (lake whitefish): 121572638
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Entry
121572638 CDS
T08357
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121572638
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121572638
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121572638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
Ank_5
UBA_ARI1
Ank_4
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121572638
NCBI-ProteinID:
XP_045078233
LinkDB
All DBs
Position
8:61311151..61351608
Genome browser
AA seq
1472 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYDGNSQFKEGLDPNASYGETYQHNTPLHYTCRHAMTR
LLRSFLFSKEGNPNKRNMQNETCLHVLCQGVHILLLPEGALSHRLVRPQRDEQRRADCLQ
MILSWTGARLDRGQYERANVNATDNRNSTSLHYAAAAGMKSCVELLVQAGSDLFVEDEEK
LTPCDHAERQQQTHLALCLEAMMVFSQHTHTDTHTPGSTLRHKEPYEGLKLQDLRRLKDM
LIVETADMLQAPLFTSEALLRAHDWDREKLLEAWMSDSEGCCQRSGVLMPTLPPSGYNAW
DTLPSPRTPRSPLTLTLTSPTDSCLTPGEEGGATCGICLCSISVFEDPIDISCGHEFCRA
CWEGFLNVKIQEGEAHNIFCPAYDCYQLVPVEVIESVVSREMDKRYLQFDIKAFVENNPS
IRWCPAVRCERAVRLTRPGPGVNHLGFPLLPSPAVDCGKGHLFCWECLGEAHEPCDCQTW
RMWLQKVSEMKPEELAGVSESYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCK
YDFCWICLEEWKKHSSSTGGYYRCTRYEVITQLEEQSKEMTGEAEKKHKSFQELNRFMHY
YTRYKNHEHSYKLEQRLLKTAKQKMEQLSRAFTGREGSPPDTRFMEDGVCELMKTRRVLK
CSYPYGFFLQPHSTQKEIFELMQTDLEMAVEDLAQKVNRPYLRTPCHKIVSAACLVQQKR
EEFLASVARGVAPSDSPEVPRRSFPATSWDWEYLGFTSPEEYADFQYRRRHRPRRRGDMP
SLHGLRSNSSTPEPNQDTENTEVLQERVVGRRQPLRSLDEDDPNILLAIQLSLQDSRRER
EMEGGRAREMEGGREREREGGRERGMGGELQRGSGVFEDPGLWSGQGLDIGPSTSLGVGG
LSETQAPSSVGGSLGASGSSNLPRPDPNLSLNAELLELGESLMRLGHITTPYTLDNTNIP
TPYSLGHTYDHYNPSPRYRQSQDHGYTPNTTDHNYAVLEPDHSTPYTHGYGHTCDLNQDH
TTINIPFTPEHNHSCGQNQNGGHPTINASYNSVQCQPRPYTDIPPLPDLTASCSPKHTNL
YPSDPEPYAMFSLPHNPEPDQTISYTQNTHPDHNHQHCCHSSHYTPNPDPYTPNPDPYTP
NPDPYTPNPDPYTPNPDPYTPNPDPYTPNPDPYTPNTDPYTPNPDPYTPNPDPRNLDSLT
PNPDPYTPNPDPHPCNPDHTSNPNPDHTASYTSAPHALTLDSHTLDPNHPTTEPHSLLLP
YPDLDLLLSPVVPPGGPFTPSDPGCLDPLEPSAGALLLDNIMAWIQHTHPQDHPQNITLI
PSASSETDSPPEKYSPPDAETDSPTVSPQDGGEPKSNSPPDSHVSSSVEATDELRPAQEG
EGETGRGQAGSPCPVGSLEVKRPSTLDLEGCEGEECVNTGCVSDLSQDAVDTLTHSHCGD
DHLTPTEMDSSLTPQRVDDQSPAEWEEQVHLV
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccactaagttccggaaggctctagtcagtggagacgaggcgttggca
tggcaactgtatgatggcaacagccagttcaaggaggggctggaccccaacgcatcctac
ggagagacctaccaacacaacacacccctccactacacctgcaggcacgccatgactcgc
ctgctcaggtcattcctgttcagtaaagagggtaaccctaacaagcgtaacatgcagaat
gagacatgtctgcacgtgttgtgtcagggagtgcacatcctgctgctgccagagggggcg
ctgtcacacagactagtcagaccacagagagatgaacaacgcagggcagactgcctacag
atgatcctgagctggaccggggctaggctggacagaggacagtatgagagggctaacgtt
aacgctacagacaacaggaacagcactagtctacactacgctgctgctgctggcatgaag
agctgtgtagagctcctggtccaggccgggtcagacctgtttgtggaggacgaggagaag
ttaaccccgtgtgaccacgcagagagacagcagcaaacacacctggccctgtgccttgaa
gccatgatggtgttctcacaacacacacacaccgacacacacacacccggcagcacgctg
cgccacaaagagccttatgagggtttgaagctgcaggacttgaggagactgaaggacatg
ttgatagtggagacagcggacatgctccaagctcctctcttcacctccgaggccctgctc
agagcacacgactgggatagggagaaactgttggaagcctggatgagtgactctgagggg
tgctgccagcgttccggggtcctaatgcccaccctcccgcccagcgggtacaatgcctgg
gacaccctgccctccccccgtaccccccgttcccccctcaccctcaccctcacctccccg
accgacagctgcctcaccccgggggaggagggaggagctacgtgtgggatctgcctgtgt
tccatctcggtgtttgaagacccaatagacatctcctgtggccatgagttctgccgagcc
tgctgggaagggtttctgaatgtgaagatccaggagggggaagcgcataacatattctgt
cctgcctatgactgttaccagttggtgccagttgaggttatagagagtgttgtctccaga
gagatggacaaacgatacctgcagtttgacatcaaggcgttcgtagagaacaacccgtct
atccggtggtgtccagcagtgcggtgtgagagagcagtcagactgaccagacctggtcca
ggggtcaaccacctggggttccccttgctgccctcccctgctgtcgactgtggcaaggga
cacctcttctgctgggagtgtctaggtgaggcccatgagccgtgtgactgtcagacatgg
aggatgtggctgcagaaagtctcagagatgaagccagaagagttggcaggtgtatcggag
tcgtatgaggatgcagctaactgtctgtggttgttgaccaactctaaaccctgtgccaac
tgcaagtctcccatacagaagaatgagggctgtaaccacatgcagtgtgccaagtgtaag
tatgatttctgctggatctgtctggaagagtggaagaaacacagctcttcaaccggagga
tactaccgctgtacacgctacgaagttatcacacagctagaagagcagtccaaagagatg
actggagaggcggaaaagaagcacaagagttttcaggagttgaaccgcttcatgcactac
tatacccgctataagaaccatgaacacagctataagttagaacagagactactgaaaaca
gccaaacagaagatggaacagctgagtagagccttcactggacgtgagggctcccctcca
gacaccaggtttatggaggacggtgtgtgtgagttgatgaagacacgtcgtgtgttgaag
tgttcctacccctacggattcttcctccagcctcacagcacacagaaggagatctttgaa
ctcatgcagactgatctggagatggcggtggaggacttggctcagaaggtgaaccgtccc
tacctgcgtacgccgtgtcataagatcgtcagcgctgcctgtctggtacagcagaagaga
gaggagttcctggcctcagtggctagaggggtcgcccctagcgactcacctgaagtacct
aggaggagtttccctgccacatcgtgggactgggagtacctgggattcacctctcctgag
gagtatgcagatttccagtaccgccggagacaccggccgcgtcgtagaggtgacatgccg
agtttacacggtctgaggagcaacagcagcactcctgaacccaaccaggacactgagaat
acagaggtcctccaggagagagttgtggggcggagacaacctctgaggtcactggatgaa
gacgaccccaacattctactggccatccaactgtcactccaggactcacggagggagaga
gagatggagggagggagggcgagagagatggagggagggagggagagagagagggaggga
gggagagagagagggatgggaggagaactgcagagaggctctggtgtgtttgaggaccca
ggactttggtctggacagggtctggatatagggccatcaacgagtctaggggtggggggc
ctcagtgagactcaggccccctccagtgtgggtggttctctgggggccagtggctcttct
aacctccccagaccagaccctaacctgtcgctaaatgctgagctgttagagctaggtgaa
agtctgatgagactgggacacataactactccatataccctagacaacactaatatccct
acgccatatagcttaggccacacctacgaccactacaacccttcccctagatacaggcag
agtcaggaccatggctacacacccaatacaactgaccacaactatgctgtactggaacct
gaccacagcacaccttatacacacggctacggtcacacctgtgaccttaaccaggaccac
accactatcaacattcccttcactccagaacacaaccatagttgcggtcaaaaccaaaac
ggtggccatcccactatcaatgcctcctacaactctgttcagtgccaacccagaccctac
actgacattcctcctctcccagaccttacagcgtcttgtagccctaaacacacaaacctt
tacccctcagacccagagccatatgctatgttcagccttccccataaccctgaaccagac
caaaccatctcttacacccagaacacacatcctgaccacaaccaccaacattgctgccac
tccagccactacacccctaacccagacccttacacccctaacccagacccttacacccct
aacccagacccttacacccctaacccagacccttacacccctaacccagacccttacacc
cctaacccggacccttacacccctaacccagacccttacacccctaacacagacccttac
acccctaacccagacccttacacccctaacccagaccctcgtaacctagactctctcacc
cctaacccagacccttacacccctaacccagaccctcacccttgcaacccggaccacacc
tcaaatccaaacccagaccacactgcctcctacacctcagcccctcatgccctcaccttg
gactcccacactctagaccccaatcaccctaccacagaaccccactccctcctactcccc
tacccagacctagacctcctcctgtccccagtggtccctccaggaggtcccttcaccccc
agtgacccgggctgtctggatcccctggagccctcagctggagccctgctcctggacaac
atcatggcctggatccaacacacacatccccaggaccacccccagaacatcaccctcatc
ccctccgctagctccgagactgactcacccccagagaaatactcacccccagatgcagag
acagactcacccactgtttcaccccaagacggtggggagccaaagagtaattcccctcct
gactcccatgtcagttccagcgtggaggccacagatgaactacggccggcccaggaggga
gagggcgagacggggaggggacaggctggctccccctgccctgtgggcagcctagaggtt
aaaagacccagcactctggatctggagggttgtgagggcgaggagtgtgtgaacacgggg
tgtgtgtcggacctgtcgcaggacgcagtggacacactcacacactcacactgtggagat
gaccacctcactcccactgagatggactcaagcctcaccccccagcgagtggacgaccaa
tcacccgcagagtgggaggagcaagttcacctggtgtga
DBGET
integrated database retrieval system
