Coregonus clupeaformis (lake whitefish): 121572655
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Entry
121572655 CDS
T08357
Name
(RefSeq) alanine--tRNA ligase, mitochondrial isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121572655
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121572655
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121572655
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
121572655
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121572655
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121572655
Prokaryotic type
121572655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-GeneID:
121572655
NCBI-ProteinID:
XP_045082620
LinkDB
All DBs
Position
17:complement(71421775..71449224)
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AA seq
995 aa
AA seq
DB search
MAAHMRRLTHRYRAVINKNLTSRISLRGCLSRSYSQVQTDFSSNQVRRTFTDFFHDLYQH
IIVPSSPVRPRGDPSLLFVNAGMNQFKPIFLGAADPLSEMATYRRVVNSQKCVRAGGKHN
DLEDVGRDVYHHTFFEMLGNWSFGDYFKEEACIMAWRLLTEEYRIPPERLYVSYFAGDTT
SGLPADEETRHIWLSMGVPSDHLLPFGMRDNFWEMGEIGPCGPCTEIHYDHIGGRNAASL
VNADSPDVVEIWNLVFMQYNREADHSLRSLPQFSVDTGMGLERLVTILQGQRSNYDTDLF
TPLLSAIQQCSNCPEYRGRTGEADVGKVDMAYRVVADHVRTLSVCIADGVYPGMSGAELV
LRRILRRAVRFSTEVLQAPEGALASLVPTVALILGDAYPELHKETDRIMDIINENEAQFL
SSLKQGRRVIDRTLQRLEKNDTLFPAPVAWSLHRNLGFPLDLIGLMLEEKGLSVDQQALY
ELAIENEKCQVQTSIGDTLVHLDLHSLAQLQSGEVPHTDDSPKYHYSLAQDGKYVFQPCH
ATVQALYCGQSLVSKVAGGQRCGVVLDRTCFYAEQGGQSHDQGYFIRDGLPDVLYPVEAV
QVAGGYVVHQVTAAEVLRKGDQVQLYVDEPQRLACMVKHTATHVLNFVLRQLLGPSVEQR
GSHVAADRLRFDFSVKGSLSIPQLQEIERSIHNIITENNAVYIEEVPLARAKDIPGLRTV
DELYPDPVRVVSVAVPVADLFNSQTDRRTSVELCCGTHLLRTGEIGDLVIISERQMVKGI
SRIVAVTGDDAREAREAGQNLTQEVESLSARLAVVASPSLADAHRLAKEVGILTDAVDCT
PIPQWKRRELQTRLKGLQRTTNTSIRKLETKEAAVKAQSLFKKNGNKTIVVDAVDTDSIS
VLMKTVNQYSDIAPGTLVMLLSHQQPSGKVLCACQVPKGFSALSASDWALTVCTRLGGNA
GGSATVAKGTGSVADLTEALRCAEEYAQDKTQNIR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacatgagacgcttgacacataggtacagagcagtgataaacaagaattta
acatcacgtataagcctcagaggatgtttatcaaggtcatattctcaggttcaaacagac
ttttcgtctaatcaagtgcggcgtacgttcacagatttttttcatgatctctaccaacac
ataattgtgccatcctccccggttcgtccgcggggagacccaagtctcctgtttgtcaac
gcaggcatgaaccagttcaagcccattttcctgggagcagcagacccgctcagtgaaatg
gccacataccggcgggtggtgaatagtcagaagtgtgtccgggctgggggtaaacacaac
gacctggaagatgttggtcgagatgtctaccaccacaccttctttgagatgttaggaaac
tggtcctttggcgattacttcaaggaggaagcgtgcatcatggcctggcgtctactcaca
gaggagtacaggattcctccagaacgcctctacgtctcatactttgccggtgataccacc
tctggtttgccagcagatgaggaaacgcgccacatctggctaagcatgggagtgccctct
gatcacctcctgccatttgggatgagggacaacttttgggagatgggggagattggcccc
tgtggtccctgcacagagatccactatgaccacattgggggccgtaatgcagcctcgctg
gtcaatgcggacagtcctgatgttgtcgagatttggaacctggtcttcatgcaatacaac
agagaggcagatcacagcttgcggtcactcccccagttcagcgtggacactggcatgggt
ctggagcgactggtgaccattctccaaggacaacgctccaactacgacactgacctcttt
acccctctgctgtctgctatacaacagtgctccaattgccctgagtatagagggaggact
ggagaggcggatgtgggcaaagtggacatggcataccgcgtcgttgctgaccacgtgcgc
accctgtctgtctgcattgctgacggagtctacccaggcatgtctggggccgaattggtt
ttgcgccgtatcctccggcgagctgtgaggttcagcactgaggtactgcaggcccctgag
ggagcgctggcaagcctggtacccactgttgctcttatcctgggtgatgcttatcctgaa
ctgcataaagagacagataggatcatggatataatcaatgaaaacgaggcccagttcctg
tcctctctgaagcaggggcgcagagtgattgacaggacactccagagattggagaaaaat
gacactctattcccagcgcctgtggcctggtctctgcatcgtaacctgggctttcctctg
gatctcattggactaatgctggaggagaagggcttgagtgttgaccaacaggccctttat
gagttggccattgaaaatgaaaagtgtcaggttcagacctcaattggggatacgctggtc
catctggatctgcacagcctagcccagctgcagagtggagaagtcccccacacagacgac
tctcccaagtaccactacagcttggcacaggatggcaaatatgtgttccagccctgccat
gctaccgtgcaggccctgtactgtggacagtctcttgtctcgaaggtggccgggggccag
aggtgtggtgtggtgctggaccggacctgtttctatgcagagcaaggcgggcagtcccac
gatcagggctacttcatcagagatggactgccggatgtcctgtaccctgttgaggctgtg
caggttgctgggggatatgtggttcatcaggtcactgctgctgaagtgctgagaaaagga
gaccaggtccagctctacgtagatgagccacagagactagcctgcatggtcaagcacaca
gccacacacgtcctcaacttcgtcctccgtcagctgctgggtccttctgtggagcagaga
ggcagtcatgtcgctgcagaccgcctacgctttgacttcagcgtcaagggatcattgagt
attccccagctccaggagattgagaggagcatccacaacattatcacagagaataatgcg
gtgtacatagaggaggttcccctggcccgggctaaagacatcccaggactaaggactgtg
gatgagttgtaccctgatccagtgagagtggtgtccgtggcagttcccgtggcagacctg
ttcaattctcagacggatagacggacgtcagtggagctctgctgtggaacgcatttactg
aggaccggggagatcggggatttggttataatttccgagaggcagatggttaaagggatc
agccgtatcgtggcagtcactggagacgatgccagagaggctcgagaggcgggacagaac
ctgacccaggaagtggagtctctgtcggcacgtcttgcagtggtcgccagcccctccctc
gcagatgcccaccggctggccaaagaagtgggcatactgacagatgcagtggattgcact
cccataccacagtggaagcggagagagcttcaaactcgcctcaaaggtctacagaggaca
accaacacaagcataaggaaactggagaccaaagaggctgctgtgaaagcccaatcacta
ttcaaaaagaatggcaacaagactattgtagtggacgctgtggacacagactctatatca
gtgctgatgaagacagtgaaccaatacagtgacatagccccagggaccctggtcatgcta
ctctcccaccagcagccatcggggaaggtcctgtgcgcgtgccaagtgcccaagggcttt
agtgcgctttctgcaagtgactgggccctgacagtgtgtacccgcctgggagggaacgca
ggtggctctgccactgtggcaaagggcacagggagtgtggccgacctcactgaggcactc
aggtgtgctgaagagtatgcacaggacaagacccaaaacatacgctga
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