Coregonus clupeaformis (lake whitefish): 121572664
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Entry
121572664 CDS
T08357
Name
(RefSeq) peroxisome assembly factor 2
KO
K13339
peroxin-6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121572664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121572664
Membrane trafficking [BR:
cclu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
121572664
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_33
AAA_5
RuvB_N
DUF815
ABC_tran
RNA_helicase
nSTAND3
NPHP3_N
Mg_chelatase
TsaE
AAA_7
Vps4_C
TIP49
AAA_25
IstB_IS21
AAA_28
Parvo_NS1
AAA_14
AAA_2
AAA_24
Motif
Other DBs
NCBI-GeneID:
121572664
NCBI-ProteinID:
XP_045082694
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Position
18:6335116..6351368
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AA seq
1091 aa
AA seq
DB search
MAAQVELSCLDTFPTHLNPLHVLVFKSQFRYAFPSCNEPTSTLLFTSRIRQTLGKTGVLL
CAHSTEEETPGCAADGNNTTLKLYTSKLFLKHYGLQDDIRGAVRSLSPFALRKVVIGART
RQSFKWASSDTFSNGLLILASCQGQLLLARQGDSLSLPYHPLLGDDIAQVQQYLFDLVVL
ECTPVTQGMITINTTLVVTDCRDIAQRGALETYNALATRTLTSLFVSDFAHYANSLGGGS
SLLDNRQVWDSSFSAFLQALECRLDVRIVDIPRLYRQGRIVLVDKPEAEIDIDSTVFVSK
QLLLKLGLFNREWVVVSSFNCSSEMTKTSNRGDYLRSPGQADENAPAKEPSKFAERVHLG
SVVVADFSKCAELDLQDNVGFISATHWFNLSNGEPVPVSSRAVKIKRWNRVLSQSGPQLS
ESLSRTASPLFAKELHIDAVISPEYSSHGPFDSILCGHFTIPRLVRLGGVLGIPSEGHPE
VLESNSEGITRWPVVYFKVKKVCGSTEEEEDQGPYLADTVHTSLYMGGSTNSLAPCSLVG
EEPSLWTSLSPPGLSSTVDQFSTIIQPHMNDSSAALTSGCTILLLGPSGNGKFTSVRAAC
RRLHLHLVKVDCVTLCADTAAACEAKMKSVFQRAEAHRPCILLLRNLQLLGQPRDGTEED
ARVMAALCQFIAHTPSSVVVVAAVSKPRELSSDVMAAFIHQVSIESPSEEQRRAMLARLS
EGLPLGRDVNLSRLAKHTAGFLLGALSALLTQAGKAAHRRILQSCFPEGASVQEEEDLCA
CGVTVLAQDFTNALETLQDAHSQAIGAPKIPSVRWQDVGGLQQVKREILDTVQLPLERPE
LLSLGLRRAGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENVREVF
SKARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATN
RPDLLDQSLLRPGRFDKLVYVGINEDKESQLQVLNAIVRKFKVDPSVSLQDVVERCPPQL
TGADMYALCSDAMMSAIKRKIACVTDGLDTEDTPLMLSAEDFNQALDCLKPSVSEQELLK
YKLIQQKLTTK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaggttgaactgtcatgtttagatacatttccaacgcacttaaatcctttg
cacgtgcttgttttcaagtcacaatttagatatgcgtttccaagttgcaatgagcctact
tcgacccttttatttacctcacggatacgtcaaacactcgggaaaactggtgttttgctc
tgcgcgcactcgacagaggaggagacgccaggctgtgcggcggatggaaacaacacaact
ttaaaactgtacacaagtaagctctttctcaaacactatggtcttcaggatgatataagg
ggggctgtacgctcactgtcaccgtttgcccttagaaaggttgttataggggcacgaaca
agacagagtttcaagtgggcaagctcggatacgttttccaatggacttctcatactggct
tcgtgccaagggcaactactattggcacgacaaggggactcgctatcacttccctatcac
cctctacttggagatgatatagctcaagtgcaacaatatctgttcgacttagttgtgttg
gagtgtacacctgtaacgcaggggatgataacaatcaacacaacattggtggtcaccgac
tgcagagacatcgcgcaacgtggcgcactggaaacatataatgctttggcaactagaact
ttgacctcgctatttgtctctgattttgcgcactacgcgaatagtcttggcgggggaagc
tcattacttgacaacaggcaagtatgggactcgagtttctcagcttttttgcaagcgctg
gagtgtaggctggatgtcagaatcgtggatatacctcgcttgtaccgtcaagggagaatt
gtactagtggacaagcccgaggctgaaatcgatatcgacagtactgttttcgtaagcaaa
cagttgctgctcaaactcgggttattcaaccgtgagtgggtagtggtgtctagttttaac
tgctcatctgaaatgacaaagacgtccaacagaggcgattacctgcgaagtcccgggcaa
gctgatgagaacgcacctgccaaagagccatccaagttcgccgaaagagtccacctcggc
tcggttgttgtggcagatttcagcaagtgtgccgagttggatcttcaagacaacgttggc
ttcatatcggcgactcattggttcaacttgtcaaatggagagccagtgccagtcagtagc
agagctgtgaagataaagagatggaaccgggtcctttctcagtcaggtcctcagctttct
gagagcctctctcgaacagcatcaccgctatttgccaaagaactccacattgatgctgtc
atctccccagaatacagttctcatggtccctttgacagtatcctctgtgggcactttacc
ataccaagacttgtgcggctggggggggttttgggaatcccatctgaaggccatcctgaa
gtcttggagagcaactctgagggaatcacaaggtggccggttgtgtatttcaaagtgaaa
aaggtttgtggctctacagaggaggaggaagaccaaggtccttacctggcagacactgtc
cacacatctctatacatgggcggctccaccaatagcctggctccctgttcccttgttggc
gaggagccttccctctggactagcctgtctcctcctgggctctccagcaccgtggaccaa
ttctccactatcatccagcctcacatgaatgacagctctgctgctctgacgagcggatgc
accatcctccttctgggaccgagtggaaatggcaaattcacctctgtcagagctgcatgc
cgtagactccatctacacttagtgaaggtagactgcgtgaccctctgcgctgacacggcc
gccgcctgtgaggccaagatgaagtctgtcttccagcgagctgaggcccaccggccgtgc
atcctgctgctcaggaacctgcagctgctgggccagcccagggatggcaccgaggaggat
gccagggtcatggccgccctgtgccagttcattgcccacaccccttccagcgtggtcgtg
gtggcggcggtgagtaagccccgggagctgtcgtctgacgtgatggcagcctttatccac
caggtgtcgatagagagccccagtgaggagcagcgccgggctatgctggccagactcagc
gagggcctgcccctggggagggacgtcaacctgtccaggctggccaagcacactgcgggc
tttctgttgggggccctcagtgcactgctgactcaggctggtaaagccgcccacagaagg
atactccaatcctgtttcccagagggggccagtgtgcaggaggaagaggacctctgtgcc
tgtggggtaaccgtcctggcccaggacttcaccaatgcattggagaccctccaagatgcc
cactctcaggccatcggcgccccaaagatccccagtgtgcgctggcaggacgttggcggc
ctgcagcaggtgaagcgggagatccttgacacggtgcagctgcccctggagaggcccgag
ctgctgtccctgggcctgcgccgcgccgggctgctcctctacgggccccccggcacgggc
aaaaccctgctggccaaggccgtggctaccgagtgctccatgaccttcctcagtgtcaaa
ggcccggaactcatcaacatgtacgtgggtcaaagcgaggagaacgtaagagaggtgttc
tccaaagctcgagcggcggccccctgtatcatcttctttgacgagctggactctctagcg
cccaacagagggcgcagtggagactcgggtggggtcatggacagggtggtctctcagctc
ctggctgagctcgacggacttcactcctctggggacgtgtttgtgattggagccaccaac
cggccagacctgctcgatcaatcattgctcagacctggcaggtttgacaaattggtgtat
gttgggatcaatgaagacaaagagtctcagctgcaggttttgaatgccatagtcagaaag
ttcaaggtggaccccagtgtcagtctccaggatgtggtggagcgctgccctcctcagctc
acaggggcggacatgtatgctctctgctccgacgccatgatgtctgccattaagaggaag
attgcatgtgtcactgacggtctggacacagaggatactcctctcatgctctctgccgaa
gactttaaccaagcattggattgcctcaaaccgtccgtctccgaacaagagctgctcaaa
tataaactaattcaacagaaactcaccacaaaataa
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