Coregonus clupeaformis (lake whitefish): 121572731
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Entry
121572731 CDS
T08357
Symbol
htr2cl1
Name
(RefSeq) 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1
KO
K04157
5-hydroxytryptamine receptor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
cclu04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121572731 (htr2cl1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121572731 (htr2cl1)
04082 Neuroactive ligand signaling
121572731 (htr2cl1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
121572731 (htr2cl1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121572731 (htr2cl1)
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Biogenic amine
Serotonin
121572731 (htr2cl1)
SSDB
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Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121572731
NCBI-ProteinID:
XP_041740687
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Position
8
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AA seq
569 aa
AA seq
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MGSPGGVAILGGFGSSTTASLEVGGWMVLPGGNNSTYLGLNQSLPWGVGAGGVDGNLSLG
SSQAEAVMRAPTMKEKNWPALLILVIIVLTVCGNILVILAVSLEKKLQNATNFFLRSLAV
ADMLVGILVMPISLINILYDYAWPLPSALCPIWIYLDVLFSTASIMHLCAISLDRYVAIR
NPIEHSRFNSRTKAMMKIAAVWTISIGVSMPIPVIGLHNKDKVFVDGSCVLNEERFMLIG
SFVAFFIPLVIMVVSYYLTIQVLQCQATVFLYEGKTPSHQPLQAPPTPSNHRSPAPNVQV
PPINIEGPPPSRQGSLKCLKGAEHVRQTSLLSTSPSEIISIIPSSEVASQLSSPTGRDPR
DSIGRRGMIQAIKNERRASKVLGIVFFLFLIMWCPFFITNVTYVLCQGSCNEPLLAELLN
VFVWVGYISSGVNPLVYTLFNKTYRRAFSSYMRCQYNTGPNAGVSSKSLAVTTMQCPSHA
VTPIFGHNGGNGKMGSVDRNSNCRNGGGGARADGYGMIRGVEPDDPTDDRMGMEMECPGI
MSELKPGMSELKLSVDSFCHTHMERTSSV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtccaggaggggtagcaatactgggggggttcggatcttccaccacggcctct
ctggaggtagggggctggatggtcttgccaggagggaacaattccacctaccttggactc
aaccagagtctaccctggggggtcggggctgggggagtagacggtaacctgtcgttggga
tcgtcgcaggcagaggcggtgatgcgagcaccgaccatgaaggagaagaactggccggcg
ctcctcatcctggtcatcatcgtgctgacggtgtgtggaaacatcctggtcatcctagct
gtctcattggagaagaagcttcagaacgccaccaacttcttcctgaggtctctggccgtg
gccgacatgctggtggggatactagtgatgcctatatccctcattaacatactatatgac
tatgcgtggcccctgcccagtgcattgtgtcctatctggatctacctggatgttctcttc
tctacagccagtataatgcacctgtgtgctatatctctggatcgatatgtggccataaga
aatcctattgagcacagccgcttcaactccagaactaaagctatgatgaagatagcagct
gtatggaccatatctataggagtgtcaatgcctatccctgtcatcggcctccataacaag
gacaaggtgtttgttgacggaagctgtgtcctcaacgaggagcgtttcatgctgattggc
tcgttcgtggccttcttcatcccattggtcatcatggtggtatcctactacctaaccata
caggtcctccagtgccaggcaaccgtcttcctctacgaggggaagactccctcccatcag
ccactacaggcaccgcccactccctcaaaccaccgatccccggccccaaacgtccaagtc
ccgcccataaacattgagggtcctcctcctagcagacaagggagtctgaaatgcctgaaa
ggggcagagcatgtccggcagaccagcctcctaagcacctccccctcagagatcattagc
ataattccaagttctgaggtggcgtcacagctgagctcgccgacggggcgagatccacgg
gacagtatcgggagacgggggatgatacaggccatcaagaacgagaggcgggcctccaag
gtgctggggatcgtgttcttcctcttcctgatcatgtggtgtccttttttcatcaccaac
gtcacatacgtcctctgtcagggttcatgcaacgagccgctattggccgaactcctcaac
gtcttcgtatgggtgggatatatatcctccggagttaaccctttagtgtatacgttgttt
aacaagacatatagaagggcgttttccagctatatgcgttgtcagtataacacagggcca
aacgccggagttagtagtaagtcgcttgcagttacgacgatgcagtgtccgtcacatgcc
gtcacacccatatttggacataatggtgggaatgggaagatgggaagtgtggaccggaat
agtaactgtcggaatggtggtggaggggcccgggcggatgggtatgggatgatcagaggg
gtggagcctgacgaccccacagacgacaggatggggatggagatggaatgtcctgggata
atgtcggaattaaaacccggaatgtcggagctgaagctttctgtcgacagcttctgccac
acccatatggagcgcaccagcagcgtctga
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