Coregonus clupeaformis (lake whitefish): 121572802
Help
Entry
121572802 CDS
T08357
Name
(RefSeq) tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121572802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
C1-set
Ig_2
I-set
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
121572802
NCBI-ProteinID:
XP_041740767
LinkDB
All DBs
Position
8:56316971..56323004
Genome browser
AA seq
440 aa
AA seq
DB search
MANISTIYKLSFLAFTYFMHVYGTSCPVLECWFVQEKPGRGGGFHAAMSQEKTLLYINTD
PDSEETRSKQGPSTDHDRVYYVTDPAATLCSSSLHPPEGSVQKPQCEINPFMPQPSTVQW
TVPLTDSAHSPIYLQADWYSAALQGLDGQLGLSNVMRAPTATKEPNVVLSVSSRTSMIRS
RLGEPVVLDCGFWVEASSPLSGSGFAVEWRYQFRGDGRLVLAYDGKSDRFAETQEEGAGL
DFTALHETGNASLILQEAQVRHSGTYICTVYLPYLLAQVLVELEIVEPPSLSIFPSPLPL
SVPGQVVTVQCEASGFSPLSMEFRWELTGPDGRVRPLGQGSVTGHRQGPDSTYSQTSRLE
LDSAKLDLGRGGEVTCVAVHPGGTRRASVTLNVTGVSAPSIEDSMAMVAVALGTYGLIKV
LSWTFSSGPDDANSQEKEVK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccaatatatcaacaatatataagctatcctttctcgcctttacttacttcatgcac
gtctatggaacaagttgtccagttctggagtgctggtttgtccaggagaaaccaggtaga
ggtgggggcttccatgctgctatgagccaggagaagacactactttacatcaatacagac
ccagacagtgaagaaaccaggtcaaagcagggaccatctacagaccatgatagagtctac
tacgtcactgacccagcagccaccctctgcagttcttctctgcacccaccagagggctca
gtccagaagccacagtgcgagatcaaccccttcatgccccagccatccaccgtccaatgg
acagtcccactcacggactctgcccacagtcctatctacctgcaagccgactggtactct
gctgccttgcagggccttgacggacaactgggcctctccaatgtcatgcgtgctcccaca
gcaaccaaggaacccaatgtggtgctcagtgtgtccagtagaacctccatgatccgttcc
agactcggggaaccagtggttctagactgtgggttctgggtggaggcctcttctcctctc
tctggctctggcttcgccgtggagtggcgctaccagttcaggggcgatggacgtctggtc
ctggcatacgacggcaagagtgaccgatttgccgagacccaggaagagggagcggggcta
gacttcacggctctgcacgagacaggaaatgcatctctgatcctgcaggaagctcaagtg
cgccactcaggaacctacatctgcacggtgtacttgccctatctccttgctcaggtgtta
gtggagctggagattgtagagcctccgtccctctccatcttcccctccccgctccctctc
tccgtgcccggacaggtggtgacggtgcagtgcgaggcgtcaggattctcccccctctcc
atggagttccgctgggagttaacagggccagatggtagggtcaggcccctgggtcaggga
agcgtgacgggccacagacagggcccagacagcacttacagccagaccagccgtctggag
ttggactcagccaagctggacctgggccgcggcggggaggtcacctgtgtggcggtccac
cctggaggcacccggcgggccagcgtcaccctcaatgtcaccggtgtcagtgctccctcc
attgaggactctatggcgatggttgctgtggccctggggacatatggtttgatcaaggtc
ctctcctggacatttagctctgggcccgatgatgctaactcacaagagaaggaagtgaag
taa
DBGET
integrated database retrieval system