Coregonus clupeaformis (lake whitefish): 121572830
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Entry
121572830 CDS
T08357
Name
(RefSeq) claudin-14-like
KO
K06087
claudin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04382
Cornified envelope formation
cclu04514
Cell adhesion molecule (CAM) interaction
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121572830
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121572830
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121572830
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121572830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121572830
04147 Exosome [BR:
cclu04147
]
121572830
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121572830
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121572830
Exosomal proteins of colorectal cancer cells
121572830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
121572830
NCBI-ProteinID:
XP_041740795
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All DBs
Position
29:complement(38663451..38664666)
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AA seq
248 aa
AA seq
DB search
MASMAVQLMGFFLGLLGLVGSVVATVLPHWRRTAYVGSNFITATAFLKGLWTECVWHSTG
IYQCEVYRSMLALPPDLQAARALMLLSCLTSTLAVLVSSAGMKCTRCARGSSTKHALAIS
GGVCFLSAGMLCLITVCWTTNDVILDFYNPIIPEGIRYEIGVAVYLGYVSACLSLMGGAV
LCWNCEGRPRNPLHLPRYRHPPPPLVFSTINTPNTQAPPYYPPVALKGNHTPSRTSVSSN
GYRLNDYV
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccagcatggcggtccagctgatgggcttcttcctgggtctgctggggcttgtgggt
agtgtagttgctacggtgctcccccactggaggcggacggcctatgtgggctctaacttc
atcacagccactgccttcttgaaggggctctggacggagtgtgtgtggcacagcacgggc
atctaccagtgtgaagtataccgctcaatgctggctctgccacctgacctgcaggcggca
cgggcgttgatgttgctatcctgcctgacctccaccctggcagtcctcgtgtcctctgca
gggatgaagtgtacccgctgtgcccgcggctcatccaccaagcacgccctggccatcagt
ggaggggtctgcttcctgtctgcaggcatgctctgcctaatcactgtctgctggacaacc
aatgatgtcatccttgacttctacaaccccatcatacctgaaggtataaggtatgagatt
ggtgtggcagtatatttgggctacgtctcagcctgtcttagtctgatgggaggggcggtg
ctctgttggaactgtgaggggcggcccaggaaccccctccatctacctcgttatcgccac
cctcctcctcccctcgtcttcagtactataaacacccccaacacccaagcacccccctac
tatccccctgtcgccctgaaagggaaccacaccccctcacgcacctcagtgtccagcaat
ggctacagactcaacgactacgtctga
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integrated database retrieval system