Coregonus clupeaformis (lake whitefish): 121572839
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Entry
121572839 CDS
T08357
Symbol
htr1fa
Name
(RefSeq) 5-hydroxytryptamine receptor 1F
KO
K04153
5-hydroxytryptamine receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121572839 (htr1fa)
04082 Neuroactive ligand signaling
121572839 (htr1fa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121572839 (htr1fa)
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Biogenic amine
Serotonin
121572839 (htr1fa)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
AF_0970
Motif
Other DBs
NCBI-GeneID:
121572839
NCBI-ProteinID:
XP_041740805
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Position
29
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AA seq
379 aa
AA seq
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MDLSNCTEGFFSLGDGGEEVSITPPSKILLTLTLSLLAVMTTAINSLVITAIIVTRKLHH
PANYLICSLAVTDLLVAILVMPFSILYIQRESWQMGESVCYMWLSVDITCCTCSILHLAA
IALDRYRAITDAVEYSHKRTSLRAGITVGVVWFLSVLISLPPLLWRNHGGEPEEDQCLIT
HHHIAFTLYSTLGAFYIPLLLILILYYKIYRAAQTLYLRRGASRGASQHSSMVNGTTLPS
CPPNGDPHSPDTLNPQEKSYSDPTTEGDRVRITVKSPQSESRQERECSLRRQRISGTRER
RAASTLGLILGAFVVCWLPFFLKEVIINTCGSCSTSIELADFLTWLGYLNSLINPLIYTI
FNEDFKKAFQRLVRCRHRL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtctaactgtacagaggggttcttctccctgggcgatgggggtgaagaggtt
tctataacccccccaagtaagatcctcctcaccctcaccctgtccctgctcgctgtcatg
acaacagccatcaactccctggtgatcacagccatcatcgtaaccaggaagttgcatcac
ccggccaactacctgatctgctctttggcggtgacagacctgctggtggccatcttggtc
atgccattcagcatcctctacatacagagggagagctggcagatgggagagtctgtgtgt
tacatgtggctgagtgttgacatcacctgctgcacctgttccatcctccacctggcagcc
attgctctagaccgctaccgggccatcactgacgccgtggagtattcacacaaacgcact
agcctccgagccgggatcactgtcggcgtggtctggtttctgtccgtcctcatatccctt
ccccctctcctgtggaggaaccatggtggggagccggaagaggaccagtgtctgataact
caccaccacatcgcctttaccctctactccaccctgggagccttctatatccccctgctc
ctcatcctcatcctctactataagatctacagagcagctcagactctgtacctccgcagg
ggggccagcaggggggccagccaacactcctccatggtcaacggaaccaccctcccctcc
tgcccccctaatggggacccccatagtcccgacaccctgaacccccaggagaagtcctac
tcagaccccaccacagagggagaccgcgtgcgcattactgtaaagagtccccaaagtgag
tcgaggcaggagcgtgagtgttcgttgagacggcagcgtatctcggggaccagggagcgg
cgggctgcatctacactagggctgatactgggggccttcgtggtctgctggctgcctttc
ttcctgaaggaggtgatcatcaacacatgtggctcctgcagcacctccatagagctggct
gacttcctcacctggctggggtacctcaactccctcatcaaccctctcatctacactatc
ttcaatgaggactttaagaaggccttccagagactggttaggtgtaggcatcgcctctga
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