Coregonus clupeaformis (lake whitefish): 121572887
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Entry
121572887 CDS
T08357
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572887
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121572887
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
DUF7471
Motif
Other DBs
NCBI-GeneID:
121572887
NCBI-ProteinID:
XP_041740851
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All DBs
Position
8:complement(49787325..49791327)
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AA seq
457 aa
AA seq
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MSFSQLGYPQFLSDSQEVYGVERAGSGRDGGADGGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNPQYDLKDSPGAHPGGLAVHASAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKHGSEDEEEEEIDLESIDIDKVEENPGDQREVEGEGKLAA
RDASDSGSLESQRTMSVRALRSMEGPISLIKAPVGACKNAVDLSPNAPLCQRPPQNKPKI
WSLAETATSPDSSIKPSPAVSGPHQATIPSHHPALLPGHGIYTCQIGKQLHNWANAAFLS
ANSLLGVRSLLGAVNPAGHHMPLHGALKHQDARLTQASGASCTEEESGDESSESFSPKRD
DDVNIRRSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtacccccagttcctaagtgactcccaggaggtttacggg
gtcgaacgggccggctcaggccgggatggaggcgccgatggcggcgtgaatcaggcagct
actgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaaccct
cagtacgatctgaaggacagcccaggagctcacccgggaggtctggctgtccacgccagc
gcagggttctacccgtacggccagtatggctacggcgacccgaaccgagccaaggccgct
acgagggagaccaccagcactctgaaggcctggctgcaggagcaccagaagaacccgtac
cccaccaagggagagaagatcatgctggccatcatcaccaagatgacactcacacaggtg
tccacgtggttcgccaacgcgcgccggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggacggacggatcttcagcagcgacaatgaggacgagcctgaa
aaacacgggagcgaggatgaagaagaggaggagatcgatttagaaagtatcgacatagat
aaagtcgaggagaaccccggcgatcagagggaagtggagggagaggggaagctggccgcc
agggacgcatcggattcgggtagcttggagagccagaggacgatgtctgtcagggccctc
agaagtatggaggggcctatttctctcattaaggcgcctgttggtgcttgtaaaaacgca
gtggatctttcccccaatgcaccgctgtgccagaggcccccacagaacaaacccaaaatc
tggtctctggcggagacggccacaagccctgacagttccatcaaaccttccccggctgtc
tcaggtcctcaccaggccacgatcccctcccaccacccggccctactcccgggtcatgga
atatacacttgccagatcgggaagcagctccacaactgggccaatgcggcgttcctcagt
gccaactctctgctgggcgtcaggtcgcttctcggcgcggtaaacccagccggacaccac
atgcctctccatggcgcgctgaagcatcaggatgcgcggttgacgcaggcgtcaggggca
tcgtgcacagaggaggagagtggagatgagtcgtcggagagcttcagtccaaagcgagat
gatgacgtgaatattcgcaggtctggctcgccgaagtctcccttccagctgattaccgac
agatctcaccacggaacggcgcagcgggccctctcgaccatttccacaatatga
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