Coregonus clupeaformis (lake whitefish): 121572888
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Entry
121572888 CDS
T08357
Name
(RefSeq) iroquois-class homeodomain protein irx-4-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572888
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121572888
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121572888
NCBI-ProteinID:
XP_041740853
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Position
8:49848404..49854479
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AA seq
470 aa
AA seq
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MFDIMAYPQLGYPYSPSHQFLMSTSSLANCLEPGGRSLLDSGVMPPSPQPLRCPVYESRL
LGSPGQELPTPAIGLGVYGAAYGKSQGYYGTCGGDATALYARGTLESKDGASVHVGASQT
PAYYPYDYAFGQYPYDRYGYGSSVDSAAARRKNATRETTSTLKAWLQEHQKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKVTWSPRANKSSDERGCDDDSDGAEGSQEEE
PIKSEIDVDDSVTGRCVDLQQSDLEDFDLLESDGSDCDPKHQFHTKDTPVHTPPDHRHHP
KDPSTSPLRHTTDTSRHGNERLSLSADCPKHTPDHDRTTNLFYTQQDLRSTESSKPKIWS
IAQTAAIQPEFPACMHTASPSETLSPGGYPTEVPHLKVGAAGQQDSPVATLRDWVDGVFH
DPLFRQSSFNPVLSKPAMDRAWIGLNRQVMEGRTLGQHSIEHVTSSLQHV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcatggcttacccgcagctaggatacccctactcaccttcacaccagttc
ctcatgagcacaagctctctggccaactgcctcgagcctggcggaaggtctctcctggac
tccggtgtgatgcctccctctccccagcctctccggtgcccggtgtacgagagcaggctg
ctcggctccccgggccaggagctaccaaccccggctataggtctgggtgtgtacggagct
gcctatggaaagagccagggctactatggcacctgtggaggcgacgcaacagctctatat
gccaggggaacattggagtccaaagatggagcgtctgtgcatgtgggggcctctcaaacc
cctgcttactatccgtacgattacgcatttgggcagtatccatatgaccgatatgggtat
gggtcatcagtggacagtgcagcggccaggaggaagaacgctaccagggagaccactagc
actctgaaggcctggctgcaggagcaccagaagaacccgtaccccaccaagggagagaag
atcatgctggccatcatcaccaaaatgacactcacacaggtatccacgtggtttgccaat
gcacggcggaggctgaagaaggagaacaaagtcacatggtcaccacgagccaataagagc
tctgacgagaggggctgtgatgatgacagcgatggtgcagagggatcgcaagaggaggag
ccaatcaaaagcgagatagatgttgatgattctgtaacagggaggtgtgtggacctacaa
caaagtgatctggaggattttgatctgctagagtcggatggttctgactgtgaccctaaa
caccagtttcacaccaaggacaccccagtacacacaccaccggaccaccgccaccacccc
aaagacccttccaccagcccactcagacataccacagacacatcccgacacgggaatgag
cggttgtcactctcagcagactgccccaaacacacaccagaccatgaccgaacaaccaac
ttattctacactcaacaggacctgcgaagtacagagagcagtaaacctaaaatctggtcc
atcgcacaaactgctgctatccaacctgaattccctgcatgcatgcacacagcctccccc
agcgagactctctccccaggggggtatccaactgaagtaccccacctgaaggtgggggcg
gctgggcagcaggactcgccggtggctaccctcagagattgggtggacggggtcttccac
gacccactgttcagacagagttcctttaaccctgtgttgtccaagccagccatggacagg
gcatggattgggttaaatagacaggtgatggaaggcagaactctgggacaacattctatt
gaacatgttacctcgtctttgcagcatgtatag
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