Coregonus clupeaformis (lake whitefish): 121572994
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Entry
121572994 CDS
T08357
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121572994
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
121572994
NCBI-ProteinID:
XP_045081524
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Position
16:3654569..3673691
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AA seq
598 aa
AA seq
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MSGIQSTLVNLLWLWGWWLPTVLSSCTTGRPAECKAAQSAPGTNLVGEGFNIVTMERMQA
YVIDVDNWKKTTNGTCTLCVNPFMKDQTQRLPAAVVDWRPSQQCHMKVSSMVYDSSEAFV
SSSQTDVDISWKIGLDILTPQAKGSVMVAGTHSRAAKKVMSQSKQDKYSFITQDIHCSYY
SYRLIEDPPLHPEFSRSLGLLPPLYTDQTEVDYRRFLATFGTHFIRKVKLGGRVKSITSL
RVCKAALSGYNENEVKDCLEAEASVGTSTGTAEVKTETKFCKSDLKKHDIKDSFSSTFKE
RFTEVIGGETDGTTDLLFSPKGANSMAFSDWARSLKTIPDVINYSLHPLHLLVKKASKRA
GLKKAVEDYILKHSLVKHCSGKCKGESRSSTHDSCQCVCQTSKEMTSQCCPQEKGLAHLT
VTVKKARGLWGDTTSQTDGFVKVFMGNDAKQTRVIQNNNNPMWNAALQFGTVKLSLASEL
KFAVYDEDRWSNDLLGECIVRPVKAGFHESMCPMNHGSLFYSYKVECAPGLGGLTCGEYA
PSRMNSDLAYLYTSRNALNMTQDLLAHIQMGQPLGDPLAFLVKQRDNGHPRIPALSEP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcatacagagtactctggtgaacctgctatggctgtggggatggtggctgccc
actgtcctgtcctcgtgcaccacgggtcggccagcagagtgcaaggctgcccagtcagct
cccggtaccaacctggtgggcgagggtttcaacattgtcaccatggagcgcatgcaggcc
tatgtcattgatgtggacaactggaagaagaccacgaatgggacctgtaccctctgtgtt
aaccctttcatgaaggaccagactcagaggctgcccgcagctgtggtggactggcgtccc
tcgcaacagtgtcacatgaaggtgtccagcatggtctacgactccagcgaggcgtttgtg
agcagcagccagacagatgtggacatcagttggaagattggtctggacattttgaccccc
caggctaaggggtcggtcatggtggcgggtacccactccagagctgccaaaaaggtgatg
agccagtccaagcaggacaagtacagcttcatcacacaagatatacactgctcctattac
agttaccgcctgatagaggaccctcccctgcaccctgagttctctcgctccctgggctta
ctgccccccctatacaccgaccagaccgaggttgactacagacgtttcctcgccaccttc
ggtacccacttcatcaggaaggttaaactgggggggcgggtgaagagcatcacctcactg
cgcgtgtgtaaggcggccctcagtggttacaacgagaacgaggtcaaggactgcctggag
gccgaggcctctgtcggcaccagcaccggaacagccgaagtcaaaacagagacaaagttc
tgcaagagtgacctcaaaaaacatgacatcaaggacagcttcagcagtaccttcaaagag
aggttcaccgaggtgatagggggagagacagacggaacgaccgacctgctcttctccccg
aagggtgcaaactccatggccttcagtgactgggcaagaagcctgaagaccatacctgat
gtcatcaactactccctccatcctctccacctattggtgaaaaaggccagcaagagggcg
gggctgaagaaggccgtggaggactacatcctgaaacacagcctggtcaagcactgctct
gggaagtgtaagggggagtccaggtccagtacccatgactcctgtcagtgtgtgtgccag
accagcaaggagatgaccagccagtgctgcccgcaggagaagggcctggcccacctgacc
gtcaccgtgaagaaagccaggggcctctggggggacaccacctcccagacagacggcttc
gtcaaggtgttcatgggcaacgacgccaagcagaccagggtgattcagaacaacaacaac
cccatgtggaacgcagccttacaatttgggaccgtcaagctctccctggccagtgagctc
aagtttgccgtgtacgatgaagacagatggtcgaacgatctcctgggggaatgcattgtc
cggcccgtcaaagctgggtttcacgaaagtatgtgtcccatgaatcacggcagcctgttc
tactcctacaaggtcgaatgtgccccaggacttggtggcctcacctgtggggagtacgcc
ccttccaggatgaactctgacctcgcttacctctacacctcccgcaacgccctgaacatg
actcaggatctgctggctcacatccagatgggccagcccctaggagaccctttggccttc
ttggtgaagcagagggataatggtcaccctcgtatccctgccctcagtgagccgtga
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