Coregonus clupeaformis (lake whitefish): 121573050
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Entry
121573050 CDS
T08357
Symbol
pgap4
Name
(RefSeq) transmembrane protein 246
KO
K26235
post-GPI attachment to proteins factor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
121573050 (pgap4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121573050 (pgap4)
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
121573050 (pgap4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PGAP4
TMEM70
Motif
Other DBs
NCBI-GeneID:
121573050
NCBI-ProteinID:
XP_041741020
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Position
18
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AA seq
396 aa
AA seq
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MPRWKALASQHLRWSSPVAQGLVLCIVTFGIVLPLCCHRLLYSYYYIKSMYLNDMSDEFL
AESYERGHEALEFWEASRSTTGSSGFANITKGSELLITVVTARRTEGKEFHYLLQVMQRL
ASLLRGCGEGRRCAEVLVCDVESGPLDNEDVALLESQFLVVRRSLEEQWKNRAHVNTFEK
EKRDYVYCLRKGWELARPKNVIVLEDDALPGADFFAVIRDLLSRRFALHTLYVKLYHPER
LQRYWNPEPYRILEWVGLGLVGATALLLTLSHGSPFSFSLSTTHLLFLTLYIMVAVELAG
RHYLLEARRFSPQLYAVSPATECCTPAMLFPGNSSLRAAEYLDGSFCVKGNAKDMVLYQM
ARTITGERAHSLEPNLVSHIGAFSSVRANPSRPRLL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgatggaaagctctggcgagccagcatttacggtggtccagccctgttgcccaa
ggactagttttatgtatcgtaacgtttggcatcgtactgccgttgtgctgccacaggcta
ctctattcctactactacattaaatcgatgtacttgaatgacatgagcgatgagtttcta
gcggagagctacgagagagggcacgaggctttggaattctgggaggcatcacggtctacc
accgggtcgtctggctttgccaacatcaccaagggatccgagctgttgatcactgtggta
acggccaggcgaacggagggcaaggaatttcactacctgcttcaagtgatgcagcggctg
gcgtccctcctgagaggatgcggcgaggggcggcgttgcgccgaggtgctggtgtgcgac
gtggaaagcggtcccctggacaatgaggatgtggcgctgctggagagccagttcctggtg
gtgcggcggtccctggaggagcagtggaagaaccgggctcacgtcaacacctttgagaag
gagaagagggactacgtctactgtctgcggaaaggatgggagctggcaaggcccaaaaat
gtgatagtcctcgaggacgacgcactacccggggcggacttctttgccgtgatccgagat
ttgctctcgcggcgcttcgccctccataccctctacgtcaagctctaccacccggagagg
ctgcagcgctactggaaccccgaaccctaccgtatcctggaatgggtgggactcggacta
gtcggggctaccgcactcctcctaacccttagtcacggttcacctttctctttctccctc
tccaccacccacctcctcttcctcaccttgtacatcatggttgccgtagagctggcgggc
cggcactacctactcgaggcacggcgcttctcgccgcagctctatgccgtgtccccggcg
accgagtgctgcacgcctgctatgctgtttccgggtaactcatccctcagggcggcggag
tacctggacggatcgttctgcgtcaagggcaacgctaaggacatggttctgtatcagatg
gctcggactataaccggagagagagcgcacagcctagagcccaacctggtctcccacatc
ggggctttctcctcagtcagggccaacccatccaggcctagacttctttga
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