Coregonus clupeaformis (lake whitefish): 121573292
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Entry
121573292 CDS
T08357
Name
(RefSeq) tissue-type plasminogen activator-like isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121573292
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121573292
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121573292
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
121573292
Peptidases and inhibitors [BR:
cclu01002
]
Serine peptidases
Family S1: chymotrypsin family
121573292
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
121573292
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Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
EGF
hEGF
DUF1986
EGF_Teneurin
EGF_C8A_B_C6
Trypsin_2
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
121573292
NCBI-ProteinID:
XP_041741086
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Position
18:complement(53904397..53925813)
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AA seq
609 aa
AA seq
DB search
MTIVSRGIFRTSNIPYTRTSRKDPDTTMARVLGLLLFLSALCCSLADKVDLRHTKKGTSY
YKARCVDGQSAVVRGLGDTWMRWRRQRAEYCSCASPGRVRCHYVPVITCYQSRCYNGGTC
KEAVYSSDYLCQCPPGFTGAQCEINTNEKCVVGQGKGYRGMWSISRTGSECINWNSTALR
GKTFTAKRPEANSLGLGNHNFCRNPGNDTKPWCHVYKGTQIAWEFCTLSSCPADQSPAEC
VQGSGQTYRGTTAITKRGSSCLPWDSPLITNKFYNAWRSEARELGLGSHNFCRNPDGDLG
PWCHIYRNMQLTWELCDITKCPRKPTTITTLGPRAPTTTNNRGTCGQRADSNQSRPSLRI
LGGAQQSDITEQPWQAAINVFRPIHNAHFYLCGGVLIDSCWVLSAAHCFDEGFKPERLQV
VLGRTFRKNPSSSDQIFEVEKYWTHEKFNEETFDNDIVLLKLKSDIGLCAVDSPEVMPAC
LPDPGLVLPDWTECEISGYGKEKEFDAMYSERVKRGHVRLWPHDRCVPNILSGRLVTSNM
LCAGDTRGLDDACKGDSGGPLVCPKDGRMTLMGLISWGDGCGKKDTPGVYTRVTQYTDWI
SSKKQETRQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgtttctagagggatattcagaactagcaacataccatacacaaggacaagc
agaaaagatccagacacaaccatggccagagtattgggactgctgctcttcctgtcagct
ctctgctgctctctagcggacaaagttgaccttcgtcacaccaagaaagggacaagctac
tataaagcacggtgtgtggatggccagtcggctgtggtgcgtggtcttggggacacgtgg
atgagatggaggcgacagcgtgcggagtactgcagctgtgcatcaccaggacgagtgcgc
tgtcactatgtgccagtcataacctgctatcagtcaaggtgctacaacggggggacctgt
aaggaggcggtctactcgtctgactacctgtgccagtgtccaccaggcttcactggggct
cagtgtgagatcaacaccaatgagaagtgtgtggtgggccagggtaaaggataccgtggt
atgtggagtatcagtcggaccggctcagagtgtatcaactggaactctacagccctcaga
gggaagacgttcacagctaagagaccagaggctaacagcctggggctgggcaaccacaac
ttctgccggaatccaggcaatgatactaagccatggtgtcatgtctacaagggaacccag
atagcctgggagttctgtactctctccagctgccctgcagaccagagcccagcagagtgt
gttcagggctcagggcagacgtacagggggacgacggccatcactaagaggggctccagc
tgtctcccctgggactcacccctcatcaccaacaagttctacaacgcatggaggtctgag
gccagagagctggggctgggaagtcacaacttctgcaggaacccagacggtgatctcggc
ccctggtgtcacatctacaggaacatgcagctgacctgggagctctgtgacatcaccaaa
tgcccgaggaaacctactaccatcactactctaggccccagggctcccaccactaccaac
aacagaggtacctgtggacagcgtgctgacagcaatcagagtcgcccctccttacgtatc
ctggggggggcccagcagagtgacatcacagagcagccatggcaggcagccatcaacgtg
ttccggcccattcacaatgcacacttctacctgtgtggaggggtcctcatagactcctgt
tgggtcctctctgctgcacactgcttcgacgaggggtttaaaccagagcgtctgcaagtg
gttctgggccggacgtttcgtaagaacccctccagcagtgaccagatctttgaggtggag
aagtactggacccacgaaaaattcaacgaggaaacctttgacaacgacattgtcttgctg
aagctgaagagtgatattggcctgtgtgctgtggactccccggaggtcatgcccgcctgt
ctgcctgacccaggcctggtactgcccgactggactgagtgtgagatctctggctacggc
aaagagaaggagtttgatgcgatgtactctgagcgggtgaagaggggtcacgtgaggctg
tggcctcatgaccgctgtgtccctaatatcttatctgggcgtctggtcacctctaacatg
ctgtgtgccggggacacccggggtctggacgacgcctgcaagggggactctggcggtccc
ctcgtctgtcccaaggatggcaggatgactctgatggggctgatcagctggggagatggc
tgtgggaagaaagacacgcccggggtgtacacacgtgttacacaatacactgactggatc
agcagcaagaaacaggaaactaggcagtaa
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