Coregonus clupeaformis (lake whitefish): 121573342
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Entry
121573342 CDS
T08357
Symbol
cntfr
Name
(RefSeq) ciliary neurotrophic factor receptor subunit alpha
KO
K05059
ciliary neurotrophic factor receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121573342 (cntfr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121573342 (cntfr)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121573342 (cntfr)
Cytokine receptors [BR:
cclu04050
]
Interleukin receptor families
IL6/12 receptor family
121573342 (cntfr)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Receptors
121573342 (cntfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FN3_IL27B_N
fn3
Ig_3
ig
Ig_5
V-set_CD47
I-set
Ig_2
Ig_4
Big_4
Bd3614-deam
Motif
Other DBs
NCBI-GeneID:
121573342
NCBI-ProteinID:
XP_041741173
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All DBs
Position
9:11595968..12119792
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AA seq
366 aa
AA seq
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MANTVTLLCCVVLAAVVVAYAQRRSQTGASIQYERMGGDVTMQCGSLDSEASVTWKVNGT
DVTARHREEGSRLILMEVDLSNNGLYTCFQNPNGERRDQINLRIGTSPREPTVMCRSNTY
PKGFYCSWHLQHPTSIPTDFHVNVQHNQKSLEVTRDTVHKNRCHVKFPEVFSSYPYRVNV
TAVNALGRASTAITFEEFNIVKPDPPEKVVATPIPNNVRRLEVTWNSPSTWPDVESFPLK
YFLRYRPLIRDQWQHVELSDSTFHTITDAYAGKEYIIQVAAKDTEIGTWSDWSVAVHATP
WIDEPKQIPSTTDQEPLFDTTPSPAPPSAEPHRAGVPVGGASSHLCVISPLLWYTCYLLL
WGPNLM
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaccgtaacgttgctgtgctgcgtggtgctagctgctgtggtggtggcgtac
gctcagagacgcagccagacaggagccagtattcagtatgagcgtatgggaggagacgtg
accatgcagtgtggctctctggatagcgaggccagcgtgacgtggaaggtgaacgggacg
gacgtgacggcacgccaccgggaggaggggtctaggcttatactgatggaggtggacctc
tcaaacaacggactctacacctgcttccagaaccccaatggagaacgacgggaccaaatc
aacctacgtatcggaacctcccctagggaacccacggtgatgtgtcgatccaacacctac
cctaaaggcttctactgtagctggcacctgcagcaccccacctccatacccacagacttc
cacgtcaacgtccaacacaaccagaagtccctagaagtaacgagggatacggtccataag
aaccgctgtcacgttaagttccctgaggtgttcagtagctacccctacagagtcaacgtc
acggccgtcaacgccctcggacgtgcatccaccgccatcaccttcgaagagttcaacata
gtgaagccagacccccctgaaaaggtggtggccacgcccatacccaacaacgtgcgtcgt
ctggaggtcacctggaatagcccttctacctggccagatgtagagagcttccccctgaag
tacttcctacgatacaggcccctcatcagggaccaatggcaacacgtggagttgtccgac
agtacgttccacaccataaccgatgcttatgcagggaaggagtacatcatccaggtggcg
gctaaggacacagagatcggcacctggagtgactggagcgtcgcggtgcacgccaccccg
tggatagacgaacccaaacagatcccctccaccaccgatcaggagcccctctttgacacc
accccgtccccggcccctccctcagcagaaccccatagggcgggcgtcccagtgggcggt
gcttcctcgcacctctgcgtcatctcacccctcctctggtacacctgctatctgctgcta
tggggccctaatttgatgtaa
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