Coregonus clupeaformis (lake whitefish): 121573401
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Entry
121573401 CDS
T08357
Name
(RefSeq) ras GTPase-activating-like protein IQGAP1
KO
K05767
Ras GTPase-activating-like protein IQGAP2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121573401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121573401
04147 Exosome [BR:
cclu04147
]
121573401
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121573401
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121573401
Exosomal proteins of colorectal cancer cells
121573401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
RasGAP_C
CH
IQ
MHC_I_2
bZIP_1
SHD1
DUF6944
WW
Motif
Other DBs
NCBI-GeneID:
121573401
NCBI-ProteinID:
XP_041741281
LinkDB
All DBs
Position
18:53529009..53610860
Genome browser
AA seq
1660 aa
AA seq
DB search
MYYEEKANSHKPRYGTIQDDERFSAEEMDERRRQNIAYEYLCHLEEAKQWMEACVEEELP
STTDLEESLRNGVYLGKLAKFFAPKMVSEKKIYDRDQARYKRTGLHFRHTDNTVQWLRAM
ESVGLPKIFYPETTDVYNRKNMPKVVYCIHALSLYLYKLGIAPQIQDLLGKVAFTEEEIS
NMRSELEKYGIQMPTFSKIGGILANELSVDEATLHAAVFAINEAVDKGEAAVTMGSLRNP
NAMLRNTGEELAQDYQDTLSRAKASKELQASGRCSSIATEERDVYEELLTQQEIQSCVDL
VNTQGAVQQVNQAISAQDEAALLVGLKVLALGLLGVQEANSHWYLEHFTSYCQVKSRDTG
GAVMLEREEIQRVVISCNDFAEAEKLKLEAITAINSAIRHGVAAETIEELMNPEAQLPIV
YHTAANLYQTELFSLQLQGAKAGLGHEELSVAVEMLSAVAVLNEVLDTKDPQAVTEQLTD
SPLGFSNMDHDNLHRYADTLISLRADSLSRWLEFLTWNDVQKTIDTVNLQVHEEHERIIA
ISEINEALSSGDPNQTLSALLLPTAKLQGVNPATAKHYHDVLQNTKLLICKSSGDESAVL
WLNQIQEGIHTANQDEEEALTLAGAVADINREVAEGDSQTTLQALQSPLAGLRGVLSECA
DTYQTQLGQFQDLNATTAGSSESVWVKHQIKGGYDYYYNLESREGTWEEPEDFTHNSTQL
SREEIQSVVGGVTAEYNREQLWLANEALVTQLQARVRGYLVRRAHAQRLDYLRQQEPHVV
RLQASWKGYKQKKIYKDRINVLQSNVGTVVKLQSFVKMWRAKSKYSQRLQYFKDHEKDIV
KIQAFLKANKARDDYRTLTGAQDPPLSVVRKFVHLLEQSSLDLLEEQEVTRLREEVVTKI
RSNQQMEKDLNLMDIKIGLLVKNRITLQDVVSHSKKLTVKKSKEELAAGDRQGIKALSKD
KRKKLEAYQHLFYLLQTNPSYLAKLIFQMPQNKSTKFMDTVIFTLYNYASNQREEYLLLK
LFKTALEEEIKSKVDQIQDIVTGNPTVIKMVVSFNRGARGHNTLRQLLAPVVKEIIEDKT
LGINTNPVEVYKAWVNQLETNTGEASKLPYEVTPDQAMSHKEVRAKLESSSHALRTATDK
VLNSIVSSLDNIPYGMRYIAKVLKNALHEKFPDATEDELLKIVGNLLYYRYMNPAIVAPD
GFDIIDMSAGGQLHSDQRRNLGSVAKMLQHAAANKLFEGENAHMTPMNNYISQTYQKFRV
FFQAACDVPEPEEKFNVDEYSDMVTLCKPVIYISIDEIINTHSLVLEHLEAISPDHNDLL
HELLQDLGDMPDVEALLGEGAVDPNNPNKESTLSQMAKTQISLTLTNKFELPEGDDKDTK
GLMMKTKKLIMDVIRIQPGDTLPETLETPASALQEREHAKVVELRALQDAQAPEGLKSSQ
AVLEDRQLPLEQKKRKIVRNLRTLEQAGLVTASNKYQDLINDISKDIRYQRRYRQRRKAE
LVKLQQTLSALNSKTAFYQDQTNYYDTYIKTCLDNLNRKNARRSIKLDRKVEEKGSKKWK
HQSLKYTAARLHEKGVILEIEGLQTNQFKNVMFDISPSEEVGDFEVKAKFMGVEMEKVQL
HFQDLLQLQYDGVAVMKMFDKAKVNVNLLIFLLNKKFYGK
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgtactatgaagaaaaagctaattcacacaaaccacgttatggaaccattcaggacgat
gagaggttctcggcggaggagatggacgagaggagacgacagaacatcgcctacgagtac
ctctgtcacctggaggaggccaaacagtggatggaggcgtgtgtagaggaggagctgccc
tccaccacagatctggaagagagtctgaggaacggagtctaccttggaaaactggccaag
ttcttcgccccgaagatggtgtctgagaagaagatctacgacagggaccaggcccgctac
aagcgcacaggacttcacttcagacacacagacaacacagtgcaatggctacgggccatg
gagtctgtagggctgcctaagatattctatcctgaaacgacagatgtgtacaatcgcaaa
aacatgcccaaggtggtgtactgcatacacgcattaagcttatacctgtacaaactgggc
attgcaccacagatccaggacctgctggggaaagtggccttcacagaggaggagatcagt
aacatgcggagtgagctggagaagtacggcatccagatgccaaccttcagcaagatagga
ggcatcctggccaacgagctctcggtggacgaggcaaccttgcacgctgctgtgtttgcc
atcaatgaggcggtggataagggtgaggcggctgtgaccatggggtcattgaggaacccc
aacgctatgctgaggaacactggggaagagctggcccaggactaccaggacactctgagc
cgggccaaggccagcaaggagctccaggcctcaggcaggtgctcgtccatagccacagag
gagagagatgtttatgaggagctgctgacccagcaggagatccagagctgcgtcgacctt
gttaacacccagggagcggtgcagcaggtgaaccaggccatctctgcccaggacgaggct
gctctgctagttgggctcaaggtgctggccctggggctgctgggggtccaggaggccaac
tctcactggtacctggagcacttcacctcctactgccaagtcaagtctcgggacactgga
ggtgcagtgatgctggagagggaggagattcagagggtggtcatatcctgtaacgacttt
gctgaggcagagaaactaaaactggaggccattacagcgatcaactcggccattcgtcat
ggtgtagcagcagagactatagaggagctgatgaacccagaggcccagctccccatagtc
taccataccgctgccaacctctaccagaccgaactgttcagcctgcagttacagggggca
aaggcaggcctggggcatgaggagctgtctgttgcggtggagatgctgtctgcggtggcc
gtgcttaacgaggtcctggacaccaaggacccccaggctgtcactgagcagctgactgac
tcccctctgggcttcagcaacatggaccatgacaacctgcacaggtacgcagacactctg
atcagcctcagagccgacagtctgtcccgctggctggagttcctcacctggaatgatgtt
cagaagactatcgacacggtcaacctgcaggtgcacgaggaacacgagcgtattattgct
atatctgagatcaacgaggcactgagctctggtgaccctaaccagaccctctctgccctg
ctcctgcccacggccaaactgcagggagtcaacccagccacagccaaacactaccacgac
gtcctgcagaataccaagctactcatctgcaagagctcgggggatgagtctgctgtgttg
tggctcaaccagatccaagaaggcatacacacagccaaccaagatgaagaggaagctctc
acattggctggagcagtggcagacatcaacagggaggtggcggagggggactcccagacc
accctgcaggccctccaatcaccccttgcagggctgagaggggttctgtctgagtgtgca
gacacctaccagacacagctgggccagttccaggacctcaacgctaccactgcaggcagc
agtgagagtgtgtgggtgaaacaccagatcaagggaggttatgactactactacaacctg
gagagcagagaggggacctgggaggaaccagaggacttcacacacaacagcacacagctc
agcagagaggaaatacagagtgtggttggaggtgtgacagcggagtataacagggaacag
ttatggttggccaacgaggccctggtaactcagctacaggctcgggttagaggttacctg
gtgaggagagctcacgcccagagactggactacctacgacaacaagaaccacacgtggtt
cgactacaggcctcctggaagggctataaacagaagaagatatacaaagacagaataaat
gtgcttcaaagcaacgtggggactgtcgtcaagcttcagtcgttcgttaaaatgtggaga
gccaaaagtaaatactctcaaagactgcagtatttcaaagaccacgagaaagacatagtg
aagatccaggctttcctcaaggctaacaaagccagagacgactacagaacactcaccggg
gcccaggaccctcctctgtcggtggtgcgtaagtttgtccacctgctggagcagagcagc
ctggacctgctggaagaacaggaagtgacacggctcagggaggaagtggtcactaagatc
cgctccaatcagcagatggagaaagacctcaacctgatggacattaagatcggcctgctg
gtcaagaacaggataaccctacaggatgtggtgtcccacagtaagaagctgacggtgaag
aagagtaaagaggagctggctgcaggggacaggcagggcatcaaggcactgagtaaagac
aagaggaagaaactagaggcttaccagcacctcttctacctgctgcagaccaacccttcg
tacctggccaagttgatcttccagatgccccagaacaaatctactaagttcatggacacc
gtgatcttcaccctgtataactacgcctccaaccagagagaggaatacctgctgctcaaa
ctcttcaagaccgctctggaggaggagatcaagtccaaggtggaccagatccaggacatt
gtgaccgggaaccccacggtcatcaagatggtggtgagcttcaaccgcggagcccgcggt
cacaacacgctgaggcagctgctggcaccagtggtcaaggagatcatcgaggacaagacc
ctgggcatcaacaccaaccctgtggaagtgtacaaggcttgggtcaaccagttggagacc
aacactggagaggccagtaaactgccttacgaggtgaccccggaccaggccatgtcacac
aaggaagtacgtgccaagctggagtcctccagtcacgcgctgcggacagccacagacaaa
gtgctcaactccattgtgtcgtcactggacaacatcccctatggcatgagatacattgcg
aaggtcctgaaaaatgcacttcatgaaaagttccccgacgctacagaggatgagttgttg
aagattgtagggaacctgctctactatcgctacatgaacccagccatagtggctccggac
ggcttcgacatcatcgacatgtcagccggaggtcagctccactctgaccagcgtcgtaac
ctgggctccgtggcaaagatgctgcagcacgctgccgccaacaagctgttcgagggagag
aatgcccacatgacccccatgaacaactatatctcccagacctaccagaagttcagggtg
tttttccaggcggcgtgtgacgtccctgagccggaggagaagtttaacgtggatgagtac
tctgacatggtgactctgtgcaagcctgtcatctacatctctatagatgagatcatcaac
acacattcgctagtgttggagcacctggaagcaatctcccccgaccacaacgacctgctg
catgagctgttgcaggacctaggggacatgcctgacgtggaggcactgctgggtgaagga
gcggtggatcctaacaaccccaacaaggagagcaccctgagtcagatggctaagactcag
atctccctcaccctcaccaacaagtttgagctgccggagggcgatgacaaggacacgaaa
ggcctgatgatgaaaactaagaaattgataatggatgtgatcaggatccagccaggagac
actctcccagagaccctggagaccccggcctctgccctccaggagcgtgagcatgccaag
gtggtggagctgcgtgcgttgcaggacgcccaggccccagaagggctgaagagcagccag
gcagtgctggaggacagacagctgcctctagagcagaagaagaggaagatcgtccgcaat
ctccgaaccctggagcaggctggcctcgtcaccgctagcaacaagtaccaggacctcatc
aacgacatctccaaggacattcgttaccagaggcgttacagacagaggaggaaggcggag
ctagtgaagctccagcagacactgagtgcgctcaactcaaagacagccttctatcaggac
cagaccaactactatgacacctacatcaagacctgcctcgacaacctcaacaggaagaat
gcgcggcggtccataaagctggacaggaaggtggaggagaagggcagtaagaagtggaag
catcagtctctgaagtacacggcggcccggctgcatgagaagggagtgatcctggagata
gaggggctgcaaaccaaccagttcaaaaatgtaatgtttgacatctcgcccagtgaggaa
gttggagactttgaggtgaaggccaagtttatgggagttgagatggaaaaggtccaactc
catttccaggacctgctccaacttcagtacgacggagtggcggtgatgaagatgtttgac
aaggccaaagtcaacgtcaacctgctcatcttcctcctcaacaagaagttctatggaaaa
taa
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integrated database retrieval system
