Coregonus clupeaformis (lake whitefish): 121573440
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Entry
121573440 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121573440
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121573440
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121573440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
PHD_2
zf-C3HC4_2
zf-RING_2
Rad60-SLD
Prok-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121573440
NCBI-ProteinID:
XP_041741376
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All DBs
Position
9:complement(20522693..20564076)
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AA seq
958 aa
AA seq
DB search
MWIQIRTIDGKETRTIEDLSRLTKIESLRLKIQEIFNVNPGQQRLFYRGKQMEDGHTLYD
YNVGLNDIVQLLIRSQAGDAPDSPLIPPSVISPVVSPKECDTMPMSCSTALPPNTTTGAT
TTPPHSKLTTVAPTPTPKPTTVNNNTTTTGNTRTTTNTSTTASKKMSNTSKPNNNGDKSS
SGPPAPLEKLDNQPSTSTRPFLIDAGIGVFKINELVDCRDISIGAWFEASIDNVLRTPKG
QNSTSKAAPTAGKVGRPSKRTNGKLETEPGQGQSHLSSSDNNNNNNNGNNSSSALNSDSS
GSGAGPSTSQTDYTVTDKEKEDVTYHIRYDDYPENGVVEMCGGNVRPRARTLLRWDQLTV
GLVVMVNYNIEIPEERGFWFDAEITALNEISRTNKEVRIKILLGGPGDVIPDCKLLFLDE
IYQIEKIGAHSLSAVDGQFKRKSGPECKHCKADPESECRFCSCCVCGGKQDAHMQLLCDE
CNMAFHIYCLNPPLATIPDDEDWYCPTCKNDTSEVVKAGEKLKASKKKAKMPSAHTESQR
DWGKGMACVGRTKECTIVPSNHYGPVPGVPVGTTWKFRVQVSEAGVHRPHVGGIHGRSND
GSYSLVLAGGFEDEVDRGDEFTYTGSGGRDLSGNKRIGEHSFDQTLTHYNRALALNCDAP
INDKDGAESRNWRAGKPVRVVRSSKGRRISKYAPEEGNRYDGIYKVVKYWPEKGKCGFLV
WRYLLRRDDLEPAPWTPEGLERIQTLGLAVQYPPGYVEAMANKTKKEANARPGSTRSKKH
HGRGRPRLQPLEKKVKKGEEEEEMPMEVTDQPQSNGSQNTPKDKETEVCKESAEPRAKRQ
KMEESFQLTEQQQSLIKEDQPNRKNWDEAMGHLKEGPNFLRKVEQTFMCVCCQELAYQPI
TTVCTHNVCKTCLQRSFRAEVYTCPACRHDLGKDYVMVLNKTLQLLLDQFFPGYSKGR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcaaattcggaccatagacggaaaggagacacgaaccattgaggatctttcc
aggctgaccaaaattgagtctctgaggctgaaaatccaagagatcttcaatgtaaacccc
ggacaacaacggttattctatcggggcaaacagatggaagatggccatacactgtatgac
tacaacgtgggtctgaacgacatcgtccagctgctcattcgttcccaagcgggggacgct
ccagacagtcccctcatccctccctccgtcatctcccctgtcgtcagccccaaggagtgt
gacacaatgcccatgtcctgcagtacagctctgccacccaacaccacaactggtgcaact
accacccccccccactctaagcttaccaccgtggccccaacacctacccccaaacccacc
acagtcaacaacaacacaaccaccactggcaacaccagaactaccaccaacaccagtaca
actgccagtaagaaaatgagtaacaccagtaaacccaataacaacggagacaagtcttct
tctggtccacctgcaccgctggagaagctcgacaaccagccttcaacctctacacgtccc
ttcctcatagatgcgggcattggggtgttcaagataaacgagttggtggactgcagagac
ataagcatcggtgcctggtttgaagccagcattgacaacgtgttacgcaccccaaaggga
cagaacagcaccagtaaagcagctcctacagcagggaaagttggcaggcctagcaaaagg
actaacggcaagctggagacagagccaggccaaggccaaagccacctctcctcctcagac
aataataataataataataatgggaataattcttcttctgcattgaactctgacagtagt
gggtcaggggctgggccctccacctctcaaacagactataccgtcacagacaaagagaag
gaggatgtgacgtatcatatcagatatgatgattaccctgagaacggcgtggtggagatg
tgtggcggtaacgtgcggccgcgggctcggaccctactcaggtgggaccagctcacggta
ggcctggttgtcatggtgaactacaacatagagatccctgaggagaggggcttctggttc
gacgctgagattacagcactcaatgagatctccaggaccaacaaggaggtccgcatcaag
atcctgctgggagggccaggggacgtcatcccagactgtaagctgttgtttctggatgag
atctatcagattgagaagattggagcacactcgctgtctgctgtagatggacagttcaaa
cggaagagcgggccggagtgtaagcactgcaaggcggaccccgagtcggagtgcaggttc
tgctcgtgctgtgtgtgcggagggaagcaggacgcccatatgcagctgctgtgtgatgag
tgtaacatggccttccatatatactgtctcaacccaccactagccaccatacctgacgac
gaggactggtactgtcccacctgtaagaacgacaccagtgaggtggttaaggccggggag
aagctgaaggccagtaagaagaaagccaagatgccctcggcccatacagagagccagagg
gactggggcaagggtatggcctgtgtggggcgcactaaggaatgtaccatcgtcccctcc
aaccattacgggcctgtacctggggttcccgtgggaacaacatggaagttccgcgttcag
gtgagcgaggcgggagtgcacaggccccacgtgggaggtatccacggccgcagtaacgac
ggctcctattcgctggtgctggctgggggcttcgaagatgaagtggacaggggagatgag
ttcacctacacaggcagtggaggtcgcgacctttcagggaacaagcgcatcggggagcat
tcctttgaccagaccctgacccactataacagggccctggcgctgaactgcgacgccccc
atcaacgacaaggacggggcggaatccaggaactggcgtgcggggaagccggtgagggtg
gtgcggagctccaaaggccgacgcatcagcaagtacgctccggaggagggcaaccgctac
gatggcatctacaaggtggtgaagtactggccagagaaagggaagtgtggtttcctggtg
tggaggtacctgctgcggagggatgatctggagcccgctccctggacacctgagggcctg
gagcgcatccagacactgggcctggctgtgcagtatcctccaggctacgtggaggccatg
gccaacaagaccaagaaggaggctaacgcccggccagggtccaccaggagcaagaagcac
catggacgaggccggccgcggctacaacccctggagaagaaggtgaagaagggggaggag
gaggaagagatgcccatggaggttacagaccagccacagagcaacggtagtcagaacact
cccaaggacaaggagacagaggtgtgtaaggagtcggcggagccccgagccaagcgtcag
aagatggaggagtcgttccagctgacagagcagcagcaaagcctcataaaggaagaccaa
cccaacagaaagaactgggacgaggccatgggacacctcaaggaggggccgaacttcctg
aggaaggtggaacagacgttcatgtgtgtctgctgccaggagctggcctaccagcccatc
accaccgtctgtacacacaatgtgtgcaagacctgtctccagcggtcattccgtgctgag
gtgtacacctgccctgcctgtcgccacgacctggggaaggactacgtcatggtcctaaac
aagactctacagctgctgctggaccagttcttccctggctacagcaagggccgatga
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