Coregonus clupeaformis (lake whitefish): 121573463 Help Entry 121573463         CDS       T08357                                  Name (RefSeq) roquin-2 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cclu03000]     121573463    04121 Ubiquitin system [BR:cclu04121]     121573463 Transcription factors [BR:cclu03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     121573463 Ubiquitin system [BR:cclu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     121573463 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf_CCCH_4 zf-CCCH_UNK Prok-RING_4 zf-RING_10 Motif Other DBs NCBI-GeneID:  121573463 NCBI-ProteinID:  XP_045078448 LinkDB All DBs Position 9:complement(22158282..22201301) Genome browser AA seq 1125 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDSNGHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD IDLLPVNCALLQLVGAQAVESQPVSLSSAVEVDHYEVCRVCVEELALYLKPISGGKGVVT LSPSMLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPATQEDALKLVLLALEDGLALSRKVLVLFVVQKLEARFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLIHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNSLRPHLKLLANI DHIPDAAAPSWEELESVMLAVKVVVHGLVEFIHNFSKKNHETPQPQANSKYKTSMCRDLR QQGGCPRGSNCTFAHTQDELETNRMRNKKISGVGRPYALAQGSMGSGLSMEGDDSGEEAC TGGLKGSDKGGSGSLTEVATHPQLIPRGGDMMENMKRERSVPNGSNGLTGSRRSSSGSME QKSISPPKTPVNHSSAPSPYGPGSRLECDSAHPKQAHYLMIRPPHQPLPHQPQSSELCYQ EPRPPYDAQPYQPASNYYPSAIHHHKPCVARFLRSSHVPESSLPPSMAPPYSEQHPSLPP PREHAGPSPYGPPQVPQYGPLAPAHGGYAPLYDSRRMWRPQLYHREDARSNSLPPEVLHS SLYQPPLRERYASLDSPYCSAGEHRAALHRDSYGRVPLGYEDLFRRKQEQWAHHHHSNVN RPSQSSPVFTVDFGAEHGDSGGGQCMNCKYRGEESLAHYSPWSCGTISTCISPFEPEHHK ASSHSCSEHLEVDNGERTRWLHTFEPYRRLKDEDPIIPFGEGPIISKWGAISRASRTGYH TTDPVQATACQGRNSTTPINFRDYGPHIDHGDNRWSSRGSDSSSHSSFLESDQLGVCELA ARRQSVSSGEKAGAGDLLQTDYCKDTTESEPDRDIELELSALDVEGTDLQDNSQQSEESL ERRDPHLLTPPSSEPQRTQKDKLSADKMEAQLLKKMAFRIEISSTPWLLIRAQTASLCPR RSLSPGSLGSGGLSMGKLMMRTGPLRLGDMGPCPNTGPEMLLNGR NT seq 3378 nt NT seq  +upstreamnt  +downstreamnt atgccagtgcaggcggcccaatggacagagttcctctcctgccccatctgctacaacgag tttgacagcaacggccacaagcccatcagtctgggctgctcacacaccgtgtgtaagacc tgtctgcacaagctgcaccgcaaggcctgccccttcgaccagactgccatcagcactgac atcgacctcctgccagtcaactgtgccctgctacagctggtgggagctcaggctgtggag tcccagcctgtgtctctgagcagtgctgtggaggtagatcactatgaggtgtgcagggtg tgtgtggaggagctggctctctacctcaaacccatcagtggaggaaaaggtgtggtgacc ctcagtccgagcatgctcagtcggcccatgcagaggaagctagtgacgctcgtcaactgt cagctggtggaggaggaggggcgggtgcgggcggtgcgggcgggcaggtcgctaggggaa cgtaccgttacagagctcatcctgcagcaccagaacccacagcagctctctgctaacctg tgggctgcagtcagggcacggggatgccagttcctggggcctgccacgcaggaggacgct ctgaagctggtgttgttggctctagaggacggcttagctctgtccaggaaagttctggtg ctgtttgtggtccagaagctggaggctcggttccctcaggcctccaagacctccatagga catgtggtccagctactctacagggcctcctgctttaaggtgaccaagcgtgacgaggac tcgtcgctgatgcagctaaaggaggagttccgtacgtacgaggctctgcgtcgcgagcat gacgcccagatcgtacacatcgccatggaggcggggctccgtatctctcctgaacagtgg tcctctctgctctatggagacctcatccacaagtcacacatgcagtctatcatcgataag ctccagtccccagagtcctttgcaaagagtgtccaggagctgacgatagttctacagaga acaggagacccagccaatctgaacagcctcagaccacacctgaaactactggccaacatc gaccacatcccagatgcggcagctccgtcgtgggaggagctggagagtgtgatgctggcg gtgaaggtggtagtccatggtctggtggagtttatacacaacttcagtaagaagaaccac gagacaccacagccacaggccaacagcaagtataagaccagtatgtgtcgagacctccgg cagcaggggggctgtccccgaggatccaactgcaccttcgcacacacacaggacgagcta gagacgaacagaatgagaaacaagaagatcagtggcgtgggccggccctacgccctggcc caagggagtatgggtagtggtctgagtatggagggggatgactcaggagaggaggcttgc actgggggactgaagggctcagacaagggggggtcagggtccctaacggaggtggccaca cacccccagctcatccccaggggaggggatatgatggagaatatgaagagggagaggtct gttcccaacggatccaacggactcacaggctccagacgctcctcatctggctctatggaa cagaagtctatttctcctccaaagacacccgtaaatcactcctcagctccttctccctat ggcccagggtctagactagagtgtgactctgcacaccccaaacaggcccactacctaatg ataagacccccgcatcagccccttccccaccaacctcagtcctctgaactgtgctaccag gaaccccgacctccctacgacgcgcagccctaccagccagccagtaactactacccctct gcgatacaccaccacaaaccctgcgtggctcgcttcctccgttccagccacgtcccagag tcctctctgcccccatccatggcccctccgtactcagagcagcacccctccttgccccca ccacgggaacatgctggtccctctccctacggtccgccacaggtcccccagtacgggccc ctggccccggcccacggtggctacgctcccctgtatgacagccggcgtatgtggaggccc cagctgtaccacagagaggacgccaggagtaactcgctgcctcccgaggtgctgcactcc tctctgtaccagccccccctccgagagagatacgcctccctggacagcccctactgctca gcgggggagcatagagcagcgctgcacagggactcttatgggcgtgttcctcttggatat gaggatctgttcaggcggaaacaggagcagtgggcacaccatcaccacagcaacgtgaac aggccctcacagtcctcccctgtcttcaccgtagactttggtgcagagcatggtgacagt ggtggtggtcagtgtatgaactgtaagtaccgtggagaggagagtctggcccactactct ccctggtcctgtggaaccatcagtacctgcatcagccccttcgaaccagagcatcacaag gcctcatctcactcctgctccgaacacttagaagtagacaatggtgaaaggacgcggtgg ctacacacatttgagccctaccgccgtctgaaagacgaggaccccatcataccgtttgga gaggggcccatcatttccaaatggggggcgatatcccgcgcctcccgtacagggtaccac accaccgacccggtccaggccacggcctgtcaaggaaggaacagcaccacccccatcaac ttcagagattatggtccacacatcgaccatggggacaacaggtggagctcccgggggtct gactcatccagccactccagtttcctagagagtgaccagctgggagtgtgtgagcttgcc gcccgtcggcagtcagtcagcagtggagagaaggctggtgcaggagacctgctgcagact gactactgtaaagacacgacagagagtgaaccggacagagacatagaactggagctgtct gcactagatgtggagggcactgacctgcaggacaacagtcaacagtctgaagagtccctg gagcggagagacccccacctcctcacccctcccagcagtgaaccccagaggacccagaaa gacaagctgtcagcagacaagatggaagcacaactactgaagaagatggccttcaggata gagatctcttctactccttggttactgatcagagcccaaactgcatctctgtgtcccagg aggtctctctcccctggaagtctgggctcaggaggcctcagcatggggaagctgatgatg aggaccggccctctgaggctgggggacatgggcccttgccctaacacaggccctgagatg ctgctcaacgggagatga

DBGET integrated database retrieval system