Coregonus clupeaformis (lake whitefish): 121573494
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Entry
121573494 CDS
T08357
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu01100
Metabolic pathways
Module
cclu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121573494
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121573494
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
121573494
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
121573494
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121573494
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
DUF5320
DUF4618
Csm1_N
Motif
Other DBs
NCBI-GeneID:
121573494
NCBI-ProteinID:
XP_041741469
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Position
9:complement(23045590..23104885)
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AA seq
568 aa
AA seq
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MLRRGLLAWVSRVGVLLVLVCCSLSLLYVMTCSPHSEDNLVSHALPRPGVGVGVGGAVGG
TGAAQSGPTGLNGYQAMLAEREEQHKLHIASLKKQIAQLKEALQERSEQLKGVQDSMERA
AGGGRDGQSPGGGILGEGGQGPGADRSHADLQEFLRSQLGRSEVHQGTRLPSEYAVVPFE
SFTLQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALQSLNTPRNGADKGHTTKVYSP
SDFIEGITRTEKDKGTVYELTFKGDQRREFRKLVLFRPFGPLMKVKNERVDTANVPINII
VPLSQRADKFRHFMHNFREVCVRQDGRVHLTVVYFGKDQMNEVRSTLENTSREINFKNFT
LLQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNTQPGKKVFYPVL
FSQYNPTLIYGNHDHIPPVEQQLVIKKDTGFWRDFGFGMTCQYKSDFINIGGFDVDIKGW
GGEDVHLYRKYLHSNLLVVRSPSRGLFHLWHEKHCADELPPEQYRMCMQSKAMNEASHGQ
LGMLFFRHEIEAHLRKQKPQRPNPAKKT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgttctgctggtcctagtg
tgctgctctctgtccctcctctatgtcatgacctgcagcccccactccgaggacaacctg
gtgagccacgccctgccacgccccggggtgggggtcggggtaggaggggcagtagggggc
acgggagcagctcagagcggacccactgggctgaatggataccaagccatgcttgcagag
cgcgaggagcaacacaagctccacatcgctagtttaaagaaacagattgcccagctgaag
gaggcgctacaggagcgcagcgagcagctgaaaggagttcaagactccatggagcgggcg
gcagggggaggccgggatggccagtccccaggaggaggtatcctcggggagggaggccaa
gggccaggagccgacaggagccacgctgaccttcaggagttcctccgcagtcagctgggc
cgttcggaggtccaccaggggactagactacccagtgagtacgccgtggtgcccttcgag
agcttcaccctgcagagggtgtaccagttggagatgggcctgacgagacaccctgaggag
aagcccgtgaggaaggaccgaagggacgagctgagtgaagcgctggagacagccctgcag
agtctcaacaccccccgcaacggagcagacaagggccacaccaccaaggtctactcacca
tcagacttcatagaaggtatcactcggacggagaaagacaaaggtactgtgtatgagctc
accttcaaaggggaccagagacgtgagttcaggaagctggttctgttccgtcccttcggg
ccgctgatgaaggtgaagaatgagagggtggacacggctaacgtccccatcaacatcata
gtgcccctctcccaacgggccgacaagttcagacacttcatgcacaacttcagagaggtg
tgtgtgcggcaggacgggcgtgtccacctaacagttgtgtactttgggaaggaccaaatg
aatgaagtcaggagcacactggagaacacatctagggagatcaactttaagaacttcact
ctgctccagctgaatgaggagttctcccgggggcgtggcctggatgtgggtgccagggcg
tggaagggagggaacgttctccttttcttctgtgatgtcgacatctacttcaccgctgac
ttcctcaacacctgccgactcaacactcaacctggtaaaaaggtgttctatcccgttctg
ttcagccagtacaacccaaccctgatatacggtaaccacgaccacatccctccagtggag
cagcaactggtgattaaaaaggacacaggattctggagagactttggcttcggaatgaca
tgccaatacaaatcagatttcatcaacataggtggtttcgacgtggacataaaaggctgg
ggcggcgaggacgtgcacctttacaggaaataccttcacagcaacctgctggtggtgcgg
tccccgtctaggggcctcttccacctgtggcacgaaaagcactgcgcggacgagctgccc
ccggaacagtacaggatgtgcatgcagtccaaggccatgaacgaggcctcgcatggccag
ctggggatgctcttcttccgacacgagattgaggcacacctgcgcaagcagaaaccccag
aggccaaaccctgccaagaagacatga
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