Coregonus clupeaformis (lake whitefish): 121573502
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Entry
121573502 CDS
T08357
Name
(RefSeq) adenomatous polyposis coli protein-like isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121573502
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121573502
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121573502
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121573502
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121573502
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121573502
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121573502
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
121573502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
APC_r
EB1_binding
APC_rep
APC_u5
APC_u9
APC_N_CC
SAMP
APC_u14
Arm
APC_15aa
Suppressor_APC
APC_u15
APC_u13
ARM_ARMC5
Sec7-like_HUS
APG6_N
Motif
Other DBs
NCBI-GeneID:
121573502
NCBI-ProteinID:
XP_041741485
LinkDB
All DBs
Position
9:complement(24088340..24124862)
Genome browser
AA seq
2801 aa
AA seq
DB search
MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKHIQGSIEEDST
DSSGQIDLLERLKEISLDPNTYPGVKLRPKPSSMQGSGSGHSGDSSPSPMGSLGSLQKRG
VSNGGRDTAGYLEELEKERSLLMAELEKEEKKKDQYYAQLQNLTKRIDSLPLTENQFSLQ
TDMTRRQLEYEARQIRAAMEKQLGTCQDMEKRAQVRVTRIQQIEKDILKIQQRVQSPPAE
PESMHDQAAQDQGAQASGHSGGPNAGCSQGSSSRLDQDSASEMSLGGGSYSVPRRLTSHL
GTKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSV
LLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRVYCETCWEWQENHE
RGVDQDKNPMPSPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIGELLQVDCEIYGL
TSDHYSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSESEDLQQVIASVL
RNLSWRADVNSKKTLREVGSVRALMECALEVQKESTLKSVLSALWNLSAHCTENKADICA
VEGALAFLVSTLMYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENSCLQTLLQH
LKSHSLTIVSNACGTLWNLSARNAKDQEALWEMGAVSMLKNLIHSKHKMIAMGSAAALRN
LMANRPAKYKDANIMSPGSSLPSLHVRKQKALIEELDSQHLSETFDNIDNLSPKASHRGK
PSRHKQNVYSDYDGVSRSDGFSPNSVPVRSPYVNTPVLSSPSPRDNPRGNIDSVRAERDR
SQDRDRQRGAPSGFHPDHDSKRMQMPATTAAQIAMVMEEVNSIHLLTGLDDRSPETPNQD
PHCKTAAHGHSNVYPYTKPDHSGRPCPMPKLEYKASNDSLNSVNSTDGYGKRGQMKPSVD
SYSEDDEGKCCVYRKYPADLAHKIHNANHMEDDDGEVDTPINYSLKYSDEQLNSGRQSPS
QNERWARSKHMEEEMKQTDQRSVRSQSPGYPMYTEGNSEGEEKLKYKPRFVQTEMQQGFR
SRNSNQHLQDQSNAGPTQGMNKKMNNQTMCQSVDDYGDDKPTNYSERYSEEEQQDDQPTN
YSMKYNKEHHTEQPIDYSLKYSDSSSQKSMFSHSKSSSTQSSVKDHLSQDGSTSSVTSIK
NAGRQMQLHPSSAQTRSGPTRPGQKNTACKPPNVNQETLQTYCVEDTPICFSRGSSLSSL
SSDEDEMEGCKRNVNAARNYPTLPISEKESTGSHAQEQGTTEGQSSVQYVRMKPPRTSQV
HGDGSRHHKAVEFSSGAKSPSKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESNSI
ASSIQSELCSGMPSGIISPSDLPDSPGQTMPPSRSKTPPPPQHQHPPPMKHKKLPPPPPP
RADMAPRHAAVHAAVQRVQVLPDNDTLLHFATESTPDGFSCASSLSALSLDEPYIQKDNE
LKIMSPVHEDDQGNEAEHEHDDTTEPPSQEKHSPGEAEKYILDDSDDDDIEILEACINSA
MPTKSSRKPKKQSPSNTNSRIPPPTAHKPSQLPVYKLLPSQTRGQQKTVSFTHGEDMPRI
YCIEGTPINFSTATSLSDLTIDSPPNELTNAESCAPPCAEVSSSQIRDTIPEGESTEEKD
AGVTSSFTQAAAAENEGDDILAECISSAMPKGKIHKPFRVQKMNDQPQHPSSASPVSLVQ
QEVEKKKPTSPVKPMPQSSEYRARMIKKPQPPFHFASYPDKNKETKMLEPKMASRNFTDK
PPNADERPRPGFAFDSPQNYTPIEGTPYCFSRNDSLSSLDFEDDEPDLSKEKAQLRKDKD
QRKVSTKNRGELSARTNRANVPPTAPTKPLQQKQAVFPQASKENMGPVPDEKQKFSIEDT
PMCFSRNSSLSSLSDIDQENNNKDLQPKEEEDVTQVEAPSKPQASGYAPKAFHVEDTPVC
FSRNSSLSSLSIDSEDDLLQECISSAMPKKKKQTARNKGGNDQGDATEEKSMDGILAEEP
DLTLDLTDTHSPVSEQALSPDSESFDWKAIQEGANSIVSSLHQAAASLSRQGSSDSDSIL
SLKSGISLGSPFHLPLNSEDNKSASDKGGRPRILKPGEKSTLEAKNKEKEEEAAKALKGG
KKVYKSLITGKPRASAETPASLQQRPTAPSVPIISRGRTMIHVPGVRSSSPSTSPVQKKP
PARGPASVSKTPPTQGQNSSNSPRSIKPPAKSDPSPTRDQPGSQSGSSKASSRSGSRDST
PSRPAQQSLTTRPMQSPGRTSVSPGRNGLSPSNKLSQVPRTASPSTLSTKSSGSGRMAYT
SPGRQMGQQTPPKQTGLTRSTSGIPRSESASKSLNQCGVAGTSKKQDLSRMSSTKSSGSE
SDRSEKPALVRQSTFIKEAPSPTLKRKLEESASFESLSPSSTSQSQTPVSSPSLPDMSLT
LPYQGSQGSNWKKSPQNPNSSKNGDGKPQRGGKHDISRSHSESPSRLPNLNRKGTWKREN
SKHSSSLPRVGTWKRTGSSSSILSASSESSEKGKSEDERQPLSPSQRSPHGKDGNPLKGT
WRKIKDSEMSQSEGHDSSSMDSMDTMAMGHQMSPAVSKTEDVWVRIEDCPINNPRSGKSP
TANTPPVIDSVLVKMPSVDLLTSETHPKQSTNESVNALRLGSETNLNLFRSSEIIDKKGP
DLNPPQSNPSIVPEAHELSVAERTPFSSSNSSKHSSPSGAVAARVSPFNYTPSSRKSSAD
NATPPRPSQIPTPVSVTNSAKKRDSKGESAGESGSYIVTSV
NT seq
8406 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcatcttatgatcagctgctgaaacaagtggaggcactgaagatggagaac
tccaaccttcgacaagagcttgaggacaactccaaccacttgaccaaactggagacggaa
gcctccaatatgaaggaggtgctgaaacacatacagggaagcattgaagaagactcaacc
gattcatctggacaaatcgatctcctagaaagactgaaagaaattagcctggatcctaac
acttacccaggggtaaagctgagacctaagccatcttccatgcagggttcaggctctggg
cattcaggggacagcagccccagccccatgggttccttgggctccctccaaaagagaggg
gtgtccaatggcggcagagacaccgctggctacctggaggagctggagaaggagaggtcc
ttattgatggcggagctggagaaagaggagaagaagaaggaccagtattacgcacagctg
cagaacctcaccaagaggatcgacagcctaccgctgactgagaatcaattctccctgcag
acggatatgacccgtaggcaactggagtacgaggcgaggcagatcagagccgccatggag
aaacagctgggaacctgccaggatatggagaagagggcacaggtgagggtgactcgtatt
cagcagatagagaaggacatactgaagatccaacagcgtgtccagtctccacctgcagaa
ccagagagcatgcatgaccaggctgctcaggatcagggagcccaggcttcagggcacagt
ggtgggcctaatgctgggtgttctcagggttcgagctctcgcctggatcaggactctgcc
agtgaaatgagtttgggtgggggtagttactctgtgccccgcagactgaccagtcacttg
ggcaccaaggtggagatggtgtactcccttctctccatgctggggacccatgataaagat
gacatgtctcgcactctgctggccatgtccagttcccaggacagctgcatcgccatgcgc
cagtcgggctgtcttcccttactcatccaactcctccatggcaacgacaaggactcagtg
ctgctggggaactcccgaggcagcaaggaggcgagggcgagggccagcgccgccctccat
aacattatccactcccagcctgacgataagagagggcgcagggagatcagagtactgcac
ctcctggagcagatcagggtttactgtgagacctgctgggagtggcaggagaaccatgag
aggggagtggaccaggataaaaaccccatgccctctcccgtggagcatcagatctgccca
gcggtatgtgttctaatgaagctgtcctttgatgaagagcacaggcatgctatgaatgag
ctcgggggtctgcaggctataggggagctcctccaagtggactgtgaaatctacggcctc
accagcgaccactacagcgtcactctgaggagatacgctggcatggccctcaccaacctc
accttcggggacgtggccaataaggccacactatgttccatgaagggatgcatgagggcc
atggtggctcagctgaagtctgagagtgaggatctacagcaggtgattgccagtgtgttg
aggaacctgtcctggcgcgcggatgtgaacagtaagaagaccctccgcgaggtgggcagc
gtcagggctctgatggagtgtgccttggaggtacagaaggagtctactctgaagagtgtc
ctcagtgccctgtggaacctgtcagctcactgcactgaaaacaaagctgatatctgtgct
gtagagggggctttggccttcctggttagcactttgatgtaccgaagccaaacaaacacc
ctcgccatcattgaaagtggaggaggcatcttgcgcaatgtgtctagtctcatcgctaca
aatgaagatcacaggcaaatcctgagagagaacagctgtcttcagacactcctgcagcac
ctgaagtctcacagcctgactattgtgagcaacgcgtgtggcactctgtggaacctctcg
gcccgcaatgcaaaggaccaggaggccttgtgggaaatgggtgctgtgagcatgctgaag
aacctcatccactccaagcacaagatgatcgccatgggcagcgctgcagcactgaggaac
ctcatggccaacaggcccgccaaatacaaggacgccaacatcatgtcacctggttccagc
ctgccctctcttcacgtcaggaaacagaaagccctgatcgaggaactggactctcagcac
ctctcagagacgtttgacaatattgacaatttaagccccaaggcgtcccacaggggtaaa
ccaagcaggcacaagcagaatgtctacagtgattacgatggtgtctctagatcagacggg
tttagccctaacagtgtgcctgtgcgctccccttacgtgaacacaccagttctttcgagt
ccgtcacccagagacaacccaagggggaacatagacagtgttagggccgagagggatcgt
agccaggacagagacagacagaggggtgcacccagtggtttccacccagatcatgactct
aagagaatgcagatgcccgccacaacagcagctcagatcgccatggtgatggaggaagtg
aacagcattcacttactgactggcctggatgaccggtcaccagagacccctaatcaagac
cctcactgtaaaactgcagcacatggtcattcaaatgtatatccctacactaaacccgat
cactcgggcagaccatgtccaatgcccaagttggaatacaaggcgtccaacgacagtctc
aacagcgttaacagcactgacggctatggaaaaagaggacagatgaagccgtctgtggac
tcatactctgaggatgatgaggggaagtgttgcgtctatagaaaatatcctgcagacctc
gctcataagatccacaatgcaaaccacatggaagatgatgatggagaagttgacacacct
atcaactacagcctaaagtattctgacgagcaactgaactctggtcggcaaagtccaagc
caaaacgagagatgggcgaggtctaagcacatggaggaggagatgaaacagacagatcag
aggtctgtgcgatctcaaagcccaggctaccccatgtacacagagggcaacagtgagggg
gaggagaaattgaagtacaagcccaggttcgtgcaaacagaaatgcaacaaggattcaga
tcaaggaactccaaccaacacctacaagatcaaagcaatgctggtcccactcaaggaatg
aacaaaaagatgaacaatcagactatgtgccagtctgtggatgattacggtgatgacaaa
ccaaccaattacagtgagcgatactcagaggaagaacaacaggatgaccagccgaccaat
tacagtatgaagtacaacaaggagcatcatacagaacaaccaattgattacagtctgaag
tactccgactcctcctcccaaaaatccatgtttagtcattcaaagtcatcctccactcag
agctcagtgaaagaccatctgagccaagatggttccacatcatccgtgacatccataaag
aatgcagggagacaaatgcagctacatccatcctcggctcaaacgaggtcagggccaact
cgaccaggccagaagaacacagcatgcaaacctcctaacgtcaatcaagagaccctacag
acgtactgcgttgaggacacacccatctgtttctcaaggggtagctctctgtcatccttg
tcctcagacgaggacgaaatggaaggctgcaagaggaatgtgaatgctgctaggaactac
ccaactcttcccatctctgagaaagagtcaactggcagtcacgcccaagaacaaggcaca
accgagggccagtcgtctgtgcagtatgtccgaatgaagcctccaaggactagtcaagtt
catggagacggttccagacatcacaaagccgttgagttttcatcaggagccaaatcacca
tccaaaagtggtgcccagactcccaaaagccccccagaacactatgtgcaggagacaccc
ctcatgttcagcagatgcacgtctgtaagctccctggacagctttgagagcaactccatc
gctagctctatacagagtgaattgtgcagcgggatgcccagtggaatcatcagcccaagc
gatctgcccgacagccctggtcagaccatgcctccgagccgaagcaaaacgccacctccc
ccacaacatcaacatccacccccaatgaaacacaaaaagctgccgcctccgccgcctccg
agggcagacatggctccaaggcatgctgctgtacacgctgctgtccagagagtccaggtg
cttccggataacgacaccctgctacactttgcgacagagagtaccccagatggattctct
tgtgcgtccagcctcagtgctttaagcttagatgaaccttacattcagaaagataatgag
ctcaagataatgtctcctgttcacgaagacgaccagggaaatgaggctgagcatgagcat
gatgacactacagaacccccaagccaagagaagcattcacctggtgaggcagaaaaatac
attttggatgattcagatgatgacgatatagaaatactggaggcttgcataaactccgcc
atgccaacaaagtcatcaagaaaacccaaaaagcaatcgccttccaacactaattctaga
ataccaccacctactgcccataaaccaagccaacttcctgtgtacaagttactcccttca
caaacccgaggacaacagaagactgtaagcttcacccatggagaggacatgcctaggatt
tactgcatagagggaacccctataaatttctcaacggccacatctctcagcgacctcacc
attgattcacccccaaatgagctgaccaatgctgaaagctgtgctcctccttgtgcagaa
gtatcctccagccaaataagggatactattccagaaggggaaagtacagaggaaaaagat
gcaggtgttacttcttccttcacacaagctgctgctgcagaaaatgaaggggatgacatc
ttagcagagtgtatcagttcagccatgccaaaaggtaaaatccacaagccctttagagta
cagaaaatgaatgatcaaccacagcacccatcatcagcttctcctgttagtctagtccaa
caggaggttgaaaagaagaagcccacatcccctgttaaaccaatgccacagagtagtgag
tacagagctaggatgattaagaaaccccagccccctttccactttgcttcataccctgat
aaaaacaaagaaaccaaaatgcttgagccaaaaatggcctccagaaatttcacagataag
ccaccaaatgcagatgagaggccacggccagggtttgcttttgactcgccacagaattac
acaccaatagagggtacaccctattgcttttcacgcaatgactccctgagttccttggac
tttgaggatgatgaacctgatctctcaaaggaaaaggcccaacttagaaaagacaaagac
cagagaaaagtgtcgacgaaaaaccgtggagagctatccgcaaggacaaacagggcaaat
gtaccaccgactgctccaacaaaacctctgcagcagaagcaggcagtctttccacaagca
tccaaagaaaacatggggccagtgccagatgagaagcagaagttttccattgaggacaca
ccgatgtgtttctctagaaactcatctctcagctcgttaagtgacattgaccaagagaac
aacaacaaagatctccagccaaaagaagaggaggatgtaactcaggtggaagctccttct
aaaccccaagcctctggttacgcaccaaaagcctttcatgtagaagacacccctgtgtgt
ttctcaagaaacagttcactcagctcactaagcattgattcagaagatgaccttctacaa
gagtgcatcagttcagccatgccaaaaaagaagaaacagacagccagaaataaggggggg
aatgaccaaggagatgccactgaggagaaaagtatggatggaattttagctgaggagcct
gatctcacattggatctcactgatacacatagtccagtttctgaacaagccttatctcca
gactctgaatcttttgattggaaggccatccaagagggtgccaattccatcgtcagcagt
ttgcaccaggcagctgctagcctctctagacaaggctcatctgactctgactcaatcctc
tccctcaaatctggaatatcccttggctccccctttcacttacccttaaattcagaggat
aataaatctgcatccgacaaaggaggacgcccacggatattgaaacctggtgaaaagagc
actttagaagcaaaaaataaagaaaaggaagaggaggcagcaaaagctcttaaagggggc
aagaaagtctacaaaagtctcataacaggaaaaccacgtgccagcgctgagaccccagcc
tcattacagcagaggccgacggcccctagtgttcccataatctctcgtgggaggacaatg
atccatgtccctggtgttagaagcagttctccaagcactagcccagtccaaaagaagcct
ccagcccgtggtccagcctctgtctcaaaaactccccccactcaagggcagaactccagt
aactcacccagaagcatcaaaccacctgctaaatctgaccctagtcccaccagggatcag
cctggatctcaatcgggatcaagtaaagcttcatcacgatcaggatccagagactccaca
ccatccagaccagctcagcagtccttgaccaccagacccatgcagtcacctggtcgcacc
tctgtgtcacctggaagaaatggtctcagcccctcaaacaaattatcccaagtgcctcgc
actgcttctccaagcacattgtcaactaagtcttctggttctggcaggatggcctacacc
tcccctgggagacagatgggtcagcaaacgccacccaagcagactggcttgacgagaagc
actagcggaatccctaggagtgaatctgcctcaaagagtctgaaccagtgtggagttgct
ggcacttctaagaagcaggatttgtccaggatgtcgtccacaaagtctagtggaagtgaa
tcagaccggtcggagaaacctgccctagttcgccaatcaacgttcatcaaagaagcccct
agtccaacactgaagaggaaattggaagagtctgcctcgttcgagtctctgtccccctcc
tctaccagccagtctcaaacgcctgtgtcgagcccgtctttgccagatatgtcgttgact
ctgccctatcaagggagtcaaggaagcaactggaaaaagtcccctcagaatccaaactcc
tccaaaaatggggatgggaagcctcaaagaggagggaagcatgacatctccaggtcacat
tcagaaagcccctccaggctccctaatcttaacaggaaagggacatggaagagggaaaac
agcaaacactcatcctctctcccaagggttggcacctggaagagaaccggcagctcctct
tccatcctctctgcctcctctgagtcaagtgaaaagggcaaaagtgaggatgaacgacag
ccactgagtccatcccaaaggtctccacacggcaaagatggaaaccctttaaaaggaaca
tggaggaagataaaggacagtgaaatgtctcagtcagaaggccatgattcttcctccatg
gactcaatggacaccatggccatggggcaccaaatgagccctgcagtgtccaagactgag
gatgtgtgggtgaggattgaggactgtcccattaacaacccgaggtctggaaaatcccca
acagcaaacacacctccggtaattgacagtgttctagtcaaaatgccctctgttgatctc
ttgacaagtgaaacccatcccaaacagtccacaaatgaaagtgtaaatgctcttaggcta
ggctcagagactaatttaaacttgtttaggagcagtgagattattgataagaaagggcca
gacctcaaccctcctcagagtaacccaagcatcgtcccagaggcccatgaactgtctgtt
gctgaacgcaccccttttagctcctccaactctagcaaacacagctcaccgagtggggct
gtggctgccagggtcagccctttcaactacacccctagttccaggaagagcagtgctgac
aatgccacaccaccacgaccatcacagatacccacgcctgtcagtgtcaccaacagtgca
aaaaagagagactctaaaggagaaagtgctggagaaagtgggtcctacattgtaacctca
gtttaa
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integrated database retrieval system
