Coregonus clupeaformis (lake whitefish): 121573522
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Entry
121573522 CDS
T08357
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K-like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121573522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121573522
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
hnRNP proteins
121573522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
121573522
NCBI-ProteinID:
XP_045078468
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All DBs
Position
9:complement(24907900..24921375)
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AA seq
433 aa
AA seq
DB search
METEIEQQEEETTFSNTDTNGKRPAEDMEEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVSADIETIGEILLKMIPTLEEYQHYNGIDF
DCELRLLIHQSLAGGIIGVKGTKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPDRVV
DCIKVILELVSEAPIKGRAQPYDPNFYDETYDYGGFTMMFEERGRRPMGGFPIRGRGGFE
RMPPGRGARPMPPSRRDYDDMSPRRGPPPPLPTRGGRGGSRARNLPLPLPPPSRGGGDRF
SHQSYHGNMDDRPNSDRRGRPGDRYDSMSGGYGDNNSSWEPFQSGGRGSYSDIGGPVITT
QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQIQNAQYL
LQNSVKQYSGRFF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaatcgagcagcaggaagaagagaccactttcagcaacactgacactaac
ggtaaacgacctgctgaggacatggaggaggagcaggccttcaagcgctctcgcaacact
gacgagatggtggagctgcgggtactgctgcagagcaaaaatgctggagctgttatcgga
aagggtggcaagaatataaaagccttgcgcacagactacaatgccagtgtatcagtccct
gacagcagtggcccagagcggatcctgagtgtgagtgcagatatcgagactatcggagag
atactgctgaagatgatccctactctggaagagtaccagcattataacgggattgatttt
gactgcgagctgcgtttgctgatccatcagagtttggccggaggcatcattggggtgaaa
ggtaccaagataaaggagttaagagagaacacccagactaccatcaagctgttccaggag
tgctgtcctcactccactgaccgtgttgttctggttggaggaaagccagaccgtgtcgtc
gattgcatcaaagttatcctggagttggtatctgaggctcccatcaaagggcgcgcccag
ccttacgaccccaacttctacgacgagacatacgactacggcggcttcaccatgatgttc
gaggagcggggccgtcggcccatgggggggttccccatacggggccgggggggctttgag
cgcatgccccctggccgtggggcccgacccatgcctccctccagacgggactatgacgac
atgagccctcgccggggtccaccccctcccctgccaaccagaggagggcgtggagggagc
cgggctcgaaacctgcccctccccctaccaccaccctcaagaggaggaggggaccggttc
tctcatcagagctatcacggcaacatggacgacagacctaacagtgacagaagaggaaga
ccaggagaccgctacgacagcatgagtggtggatacggtgacaacaattcctcgtgggag
ccctttcagtctggtggccgagggtcatacagtgacatcggcggtcccgtcatcacgact
caagttaccatccccaaggatctggccggctccatcattgggaagggcggacagcgaatc
aagcagatccgtcacgagtcgggagcgtctatcaagatcgacgagccactagagggctca
gaggaccgcatcatcaccatcaatggaacacaggaccagattcagaacgcccagtatcta
ctgcagaacagtgtgaagcagtactctggtcggttcttctaa
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