Coregonus clupeaformis (lake whitefish): 121573523
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Entry
121573523 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121573523
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121573523
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121573523
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
DUF6244
Zn_SUZ12
TFIIA
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
121573523
NCBI-ProteinID:
XP_041741516
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Position
9:complement(24975583..24988517)
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AA seq
393 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTSEHAMQCILTRID
FDLYYGGEAFSVEQPQSFSCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHHGRGLGGPRARRTNMHFTSSSTGG
LSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQ
QAQVARQQLETARNATRRSNPGGNISATIPQPSAVANSAGVAESNSMASHSSQFLLTRLN
EPKMSEVERQALEGERADRSLFVQELLLSTLMREESSSSDEDERRDFASFGAMGCVDIMP
LDVALENLILRESGTGGYNSSCRSSKEPPPPPL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggtgtgagctgtgacgcgtgtttaaaagggaacttcagagggcgc
cggtacaagtgtttaatttgctacgactacgacctgtgcgcgtcgtgctacgagagcgga
gccaccacaacgagacacacgtcggagcacgccatgcagtgtatattaaccaggatagac
tttgacctgtattacggcggcgaggctttctcagtagagcagccccagagcttttcctgt
ccgtactgtggtaaaatgggctacacagagacatccctacaggagcatgtcacctcagag
catgcagagacttccacagaggtgatctgtccaatatgtgctgcgttgccgggcggggac
cccaatcatgtgactgacgactttgctgctcatctcacacttgaacaccgagcacctaga
gacttagatgagtccagtggcgtccggcacgtgcgtcggatgttccaccatggtcgcggg
ctgggcggtcctagggcacgcaggaccaacatgcactttactagcagctccaccgggggg
ctctcctcttcacagagctcctcttactcccccagtaacagggaagccatggaccccata
gcagagctattgtctcagctgtcgggcgtgcggcgctcggcgggcggccagctcaactcg
tcgggcccgtctgcgtctcagctgcagcagttacagatgcagctgcagctggagcgccag
caggcccaggtggcccggcagcagctggagacggccaggaacgccacacgacgctctaac
cccggcggcaacatcagcgccaccatcccacagcccagcgccgtcgccaactctgccggc
gtggccgagagcaattctatggcctcccacagctcccagttcctgctcacacggttgaat
gagcccaagatgtcggaggtggaacggcaggcgctggagggtgagcgtgccgaccgcagc
ctgtttgtccaggagctgctgctgagcacgctgatgcgcgaggagagctcctcttcggac
gaggatgagcggcgagactttgccagcttcggggccatgggctgcgtggatatcatgcct
ttagacgtggccctggagaacctcatcctcagggagagtggtactggcggttacaacagc
agctgtaggagctctaaggaacctccaccgcctcctctttga
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