Coregonus clupeaformis (lake whitefish): 121573589
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Entry
121573589 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121573589
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121573589
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121573589
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121573589
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121573589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UBA_4
UIM_2
Motif
Other DBs
NCBI-GeneID:
121573589
NCBI-ProteinID:
XP_041741613
LinkDB
All DBs
Position
9:complement(4222790..4265345)
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AA seq
1210 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSNGDLAEAVAFLTEKNAKV
PQKDEATYYQTTQVGNDRYISVGSQADTSEYLPHPALPGAVPSQGDTNVIDLTGDDKDDL
QRAIALSLEESSRAFRETGITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRK
RMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLHYSPPARVQDLPRNQKEHRNLPFM
QELRNLFSLMVGSKRKYVDPSRAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKA
EEDRDGKKPKNPMVELFYGRFQAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMI
EGEIESLHSSAENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLY
MDRYMDRNREITRIKREEIRRLKEQLTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFAS
SKPVCTSPLEDIDTSAPPGGTMGQLLPALSTAEQGPSCTLPEGLAPAPAPTQAPSTQQRV
PIHKPFTQSRLPPDLPMHPAPRHITEEELRVLEGCLHRWRSEVENDTHDLQGSISRIHRT
IELMYSDKSMMQVPYRLHAVLVHEGQANAGHYWAYIYNPHQRRWMKYNDISVTKSSWEEL
VRDSFGGYRNASAYCLMYINDKKPFLIEEEFDKETGQMLSGLDKLPPDLKAYVKEDNCMF
DKEMEEWDTLQARKAQQEKLALAAAAAAAAAETTTSHQPMSTEPCPSDSWAPQQDPEYME
QPSPTDDSKHLQEDTERAISKAAAEQQEERSPEGLLTALSPQSSGESLCPPPPPKPQSEA
QVNPETPLAPPSDPQPVDPSLTPPSDPDPPVEDEPLSQRTVEVAIPQVGTFVIESEEGGY
DDEAMMTPNMQGIIMSIGKARSVFEKLGPEAAFFKAIKVEYTRLLRFAQEDTAPENDYRL
QHVIVYFIHNQAPKKILERTLLMQFADRNLSFDERCKSIMKVARAKLDLVKPEEVNMEEY
EMWHQDYRNFRETTIFLMIGLELFQKKCFVEALMYLIYSYQYNRELLVKGLYRGHDDELI
GHYRRECLLKLNENAAGMFESGEEPEVSDGLSIMNELVVPCIPLLLVHDTEKDLLAVEDM
RNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKSFHDPPKLATYSTLELVERYGRVMA
SLSRVPADGR
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccaacagcattctcagaagcaccagcagactctactg
aaccagctaagggaggtcacaggcaccacagacgtccagctgctccagcaggccctgcag
gtcagtaatggagacctggcggaggcggtggcctttctgacagagaagaacgccaaggtg
ccccagaaggatgaggctacctactaccaaaccacccaggtgggcaacgacagatacatc
agcgtgggcagccaggcagacactagtgagtacttacctcacccagcactgcccggggca
gtccctagccagggagataccaacgtgattgacctgactggtgatgataaggatgacctc
cagagggcaatcgctctcagcctggaggagtccagccgggccttcagggagacgggcatc
accgacgaggagcaggccatcagcagagttctggaggccagcatagcggagaacaaggcg
agcctgaagcggacacacactgaggtgtggagtgactcgcccaaccctcacgacaggaag
aggatggagaactgccccgtcgggctcaagaacgtgggtaacacctgctggttcagcgcc
gtcatccagtctctgttcaacctgctggagttccagaggctggtgctgcattactcccct
cctgccagagtccaggacctgcctcgcaaccagaaggagcacaggaacctgcccttcatg
caggagctgaggaacctgttctcactcatggtcggttctaagaggaagtacgtggaccca
tcgcgcgccgtggagatcctcaaggacgccttcaagtccagcgagtctcagcagcaggat
gtcagtgagttcacacacaagctgttggactggctggaggatgccttccagatgaaggca
gaggaggacagagatggcaagaagccaaagaacccgatggtggagctgttctacggccgc
ttccaggctgtgggggttctggaaggaaagaagtttgagaacacagagatgttcgggcag
taccctctgcaggtgaacggctttaaggacctgcacgagtgtttggaggcagccatgatc
gagggggagatcgagtccctacactcatctgcagagaactctgccaagtctggacaggag
cattggtttaccgaactccctcctgtcttgacctttgaactgtcgagatttgagttcaac
caagccctgggtcggcctgagaagatccacaacaagctggagttcccctctatgctgtac
atggacaggtatatggacaggaaccgagagatcaccaggattaaacgagaggagatcagg
agactgaaagagcaactgactttacttcaacagcgtctggagaggtatctgagctatggc
tccggccccaagaggtttcctctggcagatgtcctgcagtacgccatggagtttgcctcc
agtaagccagtctgcacctctcccttggaggacattgacacatcagcaccccccggtggc
acaatggggcagctgctgcccgctttaagcacagccgaacagggtccctcctgcaccctt
ccagagggtttggcccccgccccggcccccacccaagctccctccacccagcagagggtg
cccatccacaagcccttcacccagtcccgactgccccctgacctgcccatgcacccagcc
ccacgccacatcactgaggaggagctccgggtgctggagggctgcctgcaccgctggaga
agcgaggtggagaacgacacccatgatcttcagggcagcatatccagaatccacagaacc
atcgagcttatgtactctgacaagtccatgatgcaggttccgtaccggctgcatgcggtg
ctggtgcacgagggccaggccaacgctggccactactgggcctacatctacaacccccac
cagcggcgctggatgaagtacaacgacatctcggtcaccaagtcctcctgggaggagctg
gtcagggactctttcggaggctaccgcaacgccagcgcctactgcctcatgtacatcaac
gacaagaagcccttcctcatagaagaggagtttgataaggagacgggtcagatgctgagt
ggtcttgataagctccctccggacctgaaggcctacgtgaaggaggacaactgcatgttt
gacaaggagatggaggagtgggacaccctgcaggcacgcaaggcccagcaggagaagctg
gccctggctgcagctgctgccgctgcagcagcagaaacaacaacgtcccatcaacctatg
agcacagagccctgtccatcagacagctgggcccctcaacaggacccagagtacatggag
cagccatcccccacagacgactccaagcacctgcaggaggacacggagagggccatctcc
aaggctgcagccgagcagcaggaggagaggagccctgagggactgcttactgcactctct
ccacagtccagtggagagagtctctgcccaccccctccccccaaaccccagtcggaggcc
caggtgaaccctgaaacacccctcgcccctccctctgacccccagcctgtggatccctcc
ctcacccctccctctgaccctgacccccccgtggaggatgagcccctttcccagcgtacg
gtagaggtggccattccccaggtgggaacctttgtcatcgagtctgaggagggggggtac
gatgacgaggccatgatgactccaaacatgcagggtattataatgtccattggcaaggcc
aggagtgtgtttgaaaagcttgggcctgaagccgccttcttcaaggccattaaggtggag
tacacccgtctgctgaggtttgcccaggaggacacggccccggagaacgactaccgtctg
cagcacgtcatcgtctacttcatccataaccaggcccccaagaagatcctggagagaacc
ctcctcatgcagttcgccgaccgcaacctaagcttcgatgaacggtgtaagagcattatg
aaggtggcccgtgccaaactagaccttgttaagccagaagaggtcaacatggaggagtat
gagatgtggcatcaggactacaggaatttccgcgagacaacaatcttcctgatgattggc
ttagagctgttccagaagaaatgctttgtggaggccttgatgtacctgatctactcgtac
cagtacaacagagagctgttggtcaaagggctgtacagaggtcacgatgatgagctcata
ggtcactaccgcagagagtgcctgctgaaactgaacgagaatgcggcggggatgtttgag
tctggtgaggagccggaggtgagcgacgggctgagcatcatgaatgagctggtggtgccg
tgtatccccctactgcttgtccacgacacggagaaggacctgctggctgtggaggacatg
aggaaccgctggtgctcctacctgggacaggagatggagcccaacctgcaggagaagctg
acggacttcctacccaagttacttgactgctcgacagagatcaaaagcttccacgaccct
ccaaagctagccacctactccaccctggagctggttgagcgctacggccgtgtcatggcc
tccttgagccgggtgcctgcggacgggagatga
DBGET
integrated database retrieval system
