Coregonus clupeaformis (lake whitefish): 121573612 Help Entry 121573612         CDS       T08357                                  Name (RefSeq) thrombospondin-4-B-like   KO K04659   thrombospondin 2/3/4/5 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04145   Phagosome cclu04510   Focal adhesion cclu04512   ECM-receptor interaction cclu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121573612  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     121573612   09144 Cellular community - eukaryotes    04510 Focal adhesion     121573612   09142 Cell motility    04820 Cytoskeleton in muscle cells     121573612  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cclu04131]     121573612   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121573612    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121573612 Membrane trafficking [BR:cclu04131]  Endocytosis   Phagocytosis    Opsonins     121573612 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121573612   Exosomal proteins of colorectal cancer cells    121573612   Exosomal proteins of bladder cancer cells    121573612 Glycosaminoglycan binding proteins [BR:cclu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121573612 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 EGF_CA COMP EGF_3 EGF EGF_MSP1_1 Motif Other DBs NCBI-GeneID:  121573612 NCBI-ProteinID:  XP_045082965 LinkDB All DBs Position 18:complement(52943961..52957109) Genome browser AA seq 947 aa AA seqDB search MGVWIREVLLSLLMLQLARTVTAQGIVYDLLVSPDCLPDLTQGGLKNKGLDEAFLLSSFR LHSKSPSHLYSIINPRDNSKYLDFTLQAKLNKVTVRYQKTDGRAGTTSFNHPSLADGKEH HVIIHASGLQRGPGRMAVYVDCRLAHIIDELPAAFGSLTPGPNRVALRTLQPTGQDELTD LKLVIEDTLDNVATLQDCSMQQSESLGTIQLLGLQSGGQDPSQMLELNKMMSEMKDLLLQ QIMETTFLRNTISECLACGLGGNMASGPGTGAGSGTSQCSPGVCFNQDMCILAEGGGFTC TPCPDGYTGDGVHCDNVDECQFNPCFPGVRCVNTAPGFRCERCPLGYTGPEINGVGVTYA QSHKQVCYDIDECQGPPDNGGCTANSHCHNTVGSFHCGECESGFPGDQVRGCRRERLCGN GQQNPCDNNAQCVVERDGSISCQCDIGWAGNGYECGKDTDIDAYPDDKLRCRDNNCKKDN CVFVPNSGQEDADRDGLGDACDDDADSDGIINIQDNCWLHPNVDQKNSDKDLHGDACDNC LTTENPNQRDTDKDGLGDDCDDDMDGDGVKNILDNCQRVPNPDQRDRDNDRVGDACDSCP DMVNPNQSDVDDDLVGDTCDTNIDSDGDGHQNTKDNCPTVINSSQLDTDKDGQGDECDND DDNDAILDEADNCRLVVNPDQTDEDNDGVGDACAGDFDQDKVIDRIDNCPENAEVTLTDF RAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTV TDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPFRAVAEPGIQLKAVKSKTGPGEYLR NSLWHTGDTNDQVRLLWKDKRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGPNLVADSGV KIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDYQEYSAQNTE NT seq 2844 nt NT seq  +upstreamnt  +downstreamnt atgggggtgtggatcagagaagtgctcctctcgctgctgatgctacagttggctaggact gtcacagcacaaggcatagtgtacgacctgctggtgtctccagactgcctgcctgacctg acgcagggagggctgaagaacaaaggtctggatgaggccttcctcctctcctccttcagg ctccacagcaaatccccctctcatctctacagcatcatcaatcccagagacaacagcaag tacctggacttcaccctgcaggccaaactcaacaaggtgacggtccgttaccagaagact gatggtagggctggcaccaccagttttaaccacccttctctggcggacggcaaagagcac catgtgattatccatgccagtggtctgcagagaggaccaggtcgtatggcagtctacgta gactgtagactggctcacatcatagatgagctgccagctgcctttgggtcgctgacacct ggacccaacagggtggctcttaggaccctgcagcccactgggcaggatgagttgacagac ctgaagctggtaatagaggacaccttagataacgtcgctacgctccaggactgcagcatg cagcagagcgagtctctgggtactattcagctactgggcctccagtcaggcggtcaggat ccgtctcagatgttggagctcaacaagatgatgtcagagatgaaggacctgctcctccag cagattatggagaccacgtttcttagaaacaccatctcagagtgtctagcctgtggtctg ggtggcaacatggcatcaggcccaggtacaggtgcagggtccggcacatcccagtgtagt ccaggtgtgtgtttcaatcaggacatgtgtatcctggccgagggaggaggcttcacctgc accccctgccctgacggatacactggagacggagttcactgtgacaacgtggacgagtgt cagtttaacccctgcttccctggtgtgaggtgtgtaaacacggctcctgggttccgctgt gagagatgtcctctgggatacactggtcctgagatcaatggagtgggcgtcacctacgca cagtcacacaaacaggtgtgttatgacatagatgaatgccagggtcctcctgacaacgga ggctgcactgccaactctcactgtcacaacactgtggggtcgttccactgtggagagtgt gaaagtgggttccccggggaccaggtgaggggctgcaggagggagaggctctgtgggaac ggccagcaaaacccctgtgacaacaacgcacagtgtgtagtggagagagacgggagcatc agctgccagtgtgacatagggtgggcaggtaacggctatgagtgtgggaaggacacagac atcgatgcttaccctgacgacaagctcaggtgcagagacaacaactgtaagaaggacaac tgtgtgtttgttccgaactctggtcaagaggacgcagacagggacggactcggggatgcc tgtgatgatgacgctgatagtgacggcatcattaacatacaggataactgttggctgcat cctaacgtggaccaaaagaacagcgataaggatctccatggcgatgcatgtgacaactgc ttgacgacggagaaccctaaccaacgggacacggacaaggacgggctaggagacgactgt gacgatgacatggatggagacggcgtgaagaacattctggataactgccagcgtgtgccc aacccagaccagagggaccgagacaacgacagggtgggagacgcctgtgacagctgtcca gacatggtcaaccccaaccagtcagatgttgatgatgatcttgtaggagacacgtgtgac accaacatagacagtgatggggacggtcaccagaacactaaggacaactgtcctacagta atcaactcctcccagctggacacagataaggatggacagggagacgagtgtgacaatgat gatgacaacgacgctatcctggacgaagcagacaactgcagactggtggtcaaccctgac cagacagatgaggacaatgatggtgtgggtgatgcgtgtgcaggggacttcgaccaggac aaggtgattgacaggatagacaactgtccagagaatgctgaggtcaccctgaccgatttc agagcctatcagacggtagtactggaccctgagggcgacgcccagattgaccccaactgg gtggtcctcaaccagggtatggagatagttcagactatgaactctgatcctggcctcgct gtaggctacacagcgttcagtggggtggactttgaggggacgttccatgtcaacacggtg actgatgatgactacgcaggcttcatcttcggctaccaggactcttcttctttctacgtg gtcatgtggaaacagactgaacagacctactggcaggctgtacccttcagagctgtggcg gagcctggcattcagctcaaggcagtgaagtctaagacgggtcccggggagtatcttagg aactccctgtggcacacaggagacaccaacgaccaggtacgcctgctgtggaaggacaag aggaacgtgggctggaaggacaaggtgtcctaccgctggtacctacagcacagaccacag gttggatacatcagggcacgtttctatgagggtcctaacctggtagcagactctggggtg aagatagacaccagtatgcgaggagggagactgggcgtcttctgtttctcccaggaaaac atcatctggtccaacctcaagtaccgctgcaacgacaccatccctgaagactaccaggag tacagtgcacagaacactgaataa

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