Coregonus clupeaformis (lake whitefish): 121573621
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Entry
121573621 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2 isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121573621
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121573621
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121573621
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
121573621
NCBI-ProteinID:
XP_041741668
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All DBs
Position
9:5881495..5906311
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AA seq
324 aa
AA seq
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MSHPSSAGGGGGGLGAGKAGGGKHGGSGGAAAAAAAVAAAAAAAAGVGTVAGSVSALPAA
VVALPSAVLPGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPL
TPSIRNLAMEKVASTLPFPCKYASAGCQLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQ
GSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEK
YEGHQQFFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLV
FDTSIAHLFADNGNLGINVTISMC
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccgtcctctgcgggcggtgggggcggaggactcggtgccgggaaagcagga
ggaggaaagcacggaggttctggaggagctgctgccgcggcagctgctgtcgccgccgcg
gccgcagcagccgctggagtaggaactgtggctgggtctgtctcggctctacctgccgct
gttgttgccttgccctcagcagtgctacctggacaatctgctgaacttacagccttgttc
gagtgcccggtttgtttcgactacgttctgccgccgattctgcaatgccaggccgggcat
ctagtttgcaaccaatgtcgtcaaaagctgagttgttgtccgacttgtcgaggccctctc
accccgagtatcaggaacttggctatggaaaaagttgcctctactctaccatttccgtgt
aagtacgcatcagccggctgccagttgtccctccaccacagtgagaagcctgaacatgag
gaggtgtgtgagttccgtccctacacctgcccgtgccccggggcctcctgtaagtggcag
ggctccctggaggccgtcatgccccacctgatgcacgcccacaagtccatcaccactctg
cagggagaggacatcgtcttcctggccacagacatcaacctgccgggggccgtggactgg
gtcatgatgcagtcctgcttcggccaccacttcatgctggtcctggagaagcaggagaag
tatgagggccaccagcagttctttgctgtagtgctgctcatcggcacgaggaagcaggcc
gagaacttcgcctaccgcctggagctcaacgggaaccggcggcgcctcacctgggaggcc
acgccccgctccatccacgacggtgtggcagccgccatcatgaacagcgactgtctggtg
tttgacacgtccatcgctcacctgtttgctgacaacggcaacctggggatcaacgtcacc
atctccatgtgctga
DBGET
integrated database retrieval system
