Coregonus clupeaformis (lake whitefish): 121573634
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Entry
121573634 CDS
T08357
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121573634 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121573634 (chrne)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121573634 (chrne)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121573634
NCBI-ProteinID:
XP_041741695
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Position
9:complement(6558747..6566005)
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AA seq
523 aa
AA seq
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MNFAMATQSFWTCLIATVGLLWGVTVPVSCNEESKLIGDLFRGYNKNIRPAAHPTDKVAV
QVKLILTNLISLNEKEETLTTNVWIEIQWNDIRLAWNTSEYFGIEVIRVPYNTVWLPDIV
LENNIDGKFDVAYYANVLIYSSGYMYWLPPAIYRSTCAIEITYFPFDYQNCTLVFRSQTY
SANELEIILAVDAETEQPIEWVDIDPEAFTENGEWAIKHRPARKLINSRYTPDDLEYQEI
SFNLVIQRKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLI
AQKVPETSLNVPLIGKYLIFVMSVTTLIATNQIVVLNISLRSPNTHTMSPTIKHVFLELV
PRFLGMDPLVDDGEAEAEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLT
RSFVDGIDVSTTASLYKSLAQAAPEIKECVDACNFITESTKQANDIGSEMESWVLIGKMI
DKVCFWVAMALFSIGTVAIFLTGHFNSVPDFPFPGENKRYLPS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcgatggcaacgcaatccttttggacgtgtttgattgcaactgtaggccta
ctctggggtgtgacagtaccagtgagttgtaatgaggagtctaagctgatcggggacctg
ttcagaggctacaacaagaacatccgtccagcagcgcaccccactgacaaggtggcggtg
caggtcaagctgattctcaccaacctcatctccctgaacgaaaaggaagagactctcacg
actaatgtctggattgagattcaatggaacgatattcgcctggcctggaacacctctgag
tattttggcatcgaggttatccgtgtgccttataacacagtgtggctccctgacattgtc
cttgagaacaacattgatggcaagtttgatgtggcctactatgccaatgtgttaatctac
tccagtggctatatgtactggctgcctccagctatctaccgcagtacatgtgccatagag
atcacctacttcccctttgactaccagaactgcactttagtctttaggtcccagacatac
agtgcaaatgagttggaaatcatactggctgttgacgcggagactgaacagcccattgag
tgggtggacattgatcctgaggccttcactgagaacggtgagtgggccataaagcaccgg
ccagccaggaagctgatcaactcacgctacactcctgatgacctggagtaccaggaaatc
tccttcaacctggttatccagaggaaacctctgttctacatcatcaacatcattctgccc
tgctcacttatctcctccctggtcgtcctggcctacttcctacctgcacaggctggggga
cagaagttaactgtgtccatctctgtcctgctggctcagactgtcttcctctttcttatt
gctcagaaggtccctgagacatctctcaatgtccctctcattggcaagtacctgatcttt
gtcatgtctgtgacaacgcttatcgccaccaaccaaatcgtggtgctcaacatctccctc
cgcagtcccaatactcacaccatgtcccccactatcaaacacgtcttcctggagcttgtc
cctcgattcctgggcatggaccctctggtggatgatggagaggcagaggcggaggtgaat
ggagtgagggagcgacggcgtagctcgttcggcctgatgcagagagcggaggagtatgtg
ctaaaacaaccacgcagcgagatgatgtttgacaaacagagagagaggcatggcctcaca
cgatcatttgtggatggtattgatgtgagcaccacagccagcctgtacaagagcctcgcc
caagctgctcctgagatcaaggaatgtgtggacgcttgtaactttatcactgagagcaca
aagcaagcaaatgacattggatcagaaatggagagctgggtattgatcgggaagatgatt
gacaaggtttgtttctgggtggccatggccctcttctccatcggaacggtcgccatcttc
ctcacgggacatttcaactccgtcccagattttccattccctggggaaaacaaacgatac
ctccccagttag
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