Coregonus clupeaformis (lake whitefish): 121573647
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Entry
121573647 CDS
T08357
Name
(RefSeq) neurite extension and migration factor-like
KO
K25862
neurite extension and migration factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121573647
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Gene cluster
GFIT
Motif
Pfam:
DUF4683
DUF5550
Motif
Other DBs
NCBI-GeneID:
121573647
NCBI-ProteinID:
XP_041741713
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All DBs
Position
9:7346503..7405905
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AA seq
1357 aa
AA seq
DB search
MDVFQEPNFAVLAPNLEQINKEDENESHIQNSNLKPDSTAIPPTANQPKGGHECERTSLS
PSSPLSPTETPEPSITTTTTDDSSSTHAISLTSSCTTKEVSPWALPEDCSNKAAFTIMEI
GSVSALSGGDCLMPQSRTCLGCFIETKDATEPEPGLDLGQDYDPCPVSCPDMAMQCMSSG
DGIRYGDQLLSDQLLSYPEHKVRAEEKTDDEKSAEDSDSEDATSKSIYEGLLLDKCNGEE
ALLANSSQDWGCFESFISESKIELLDLCSKNELSVNLFSEEDVDNYMFDDEDEDSTLGSD
VCSLKIRYESFQDNIREKTNAIQEETQFNFFPSVVAKKEGEGAVKKGAEGPQVKGEIVEV
WAAGEKVDKNNSSSSAEVTPNVSPESSYLFDFNNSTVDSGEYSDDSSCTGSSLDTCQTKQ
KHCFLSRENSSSSSQLSYGLRSKRKVRYSDDYLYDVDSIESERNTEKKDKQTVGPKKEED
DDWCPKKRRKSSRKEPPVIIKYIIINRFKGEKHMLVKLGKIDTSETTVSLSKDLVHKYQR
MAPLKDYWQKRRQEMQEQRMLAAGDKNTFPNGCRRSLNSSLTKRKYRIANRVRIQRIHAV
KLSPNHTDHKQEVGAAEDEAACTDMESISTTTSDCAARLDQGSVTGKSRLLEREGKILGN
KNVQIRKFKSEARLRLKKMKEAQQEDGKTVIHLQEVGPLSPNRNPDIVYSTAGSPQLCDD
STVSVDPNEKSIFIPAPCSPSSTMTHPVNVNSGLHVIPGGYLQTLLDASDSSSNTGLTYY
SQQHQQHPRQQFPHGLSQEENPFTNLQLAQSCVLSPPSESELQQSPSNCSNQMEPNFTHT
SWQSGGEQLPFTPDIPPESAGFSSTISLPMTNNLSLSGYSQVNVDGNRLLYDKAYLPEEP
PGLDSGLQVSQSAEEEQVQFHRVTLNTENGRLASYDSMSSLSATSSSYSSMSLKSCEKES
EEDVNENFLAHCSPKLVIQQSTDEITPLRESTDLLDISNFTPDKFRHSPLSEMSPPDTPN
LSPQVMGTEIRESLGKAREFQGETGDMTLSATPDGTKWDCNVLPQQNHDGRAINNHQFQF
HTFNDNDGTGKIDGMDVFDEQAESIGGRTKGPKSKRKTTSKQKTKGPRAPKTEKNKAPRQ
NSSSSKKLKALLDAKANAKGEESEGLFGLSEDWPLLEEHGGGWADGNNNSPVDDDQREFE
EPSNILSNIASGMAEVQRFMKVSIEPLWDPMSGLCQPPDANSLKTKTLKILAGTTANVRK
KGGYATSPVVGRGRKATGMGAKNQAKLIPSNPFFPPLMLDCNIFNKSSLGIPGICGPAHK
KMYRHKTGAKFARDENNTGKRDSSKNTALMASYEKLR
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttttcaagaacccaactttgctgtgctggctccaaacctggaacagatcaac
aaagaggatgagaacgaatcacacatccagaacagtaatctgaagccagacagcaccgcc
atcccacctacagccaatcaaccaaaaggaggccatgagtgtgagaggacctcactgagc
ccatcctcacccctcagcccaacagagacccctgagcccagtatcaccaccactaccact
gatgactcctcttccacccacgctatctccctcacctcctcttgcaccaccaaagaggtg
agtccctgggctcttccagaggactgtagtaacaaggcagctttcacaataatggagata
gggagtgtatcggccctgtctggaggggactgcctcatgccacaaagccgcacatgcctg
ggctgtttcatcgagaccaaggacgctacagagcctgagccagggctggacctgggccag
gactatgacccatgtcctgtctcctgtcctgacatggccatgcagtgcatgagttctggg
gatggtatccgctacggggatcagctgctctccgaccagctcctcagctacccagagcac
aaggtcagggcagaggagaagacagatgatgagaagtcagcggaggacagcgactcggag
gacgccacgtcgaagagtatctacgaaggcctgctccttgacaagtgcaacggtgaggag
gctctgctggccaactccagccaggactggggctgctttgagtcctttatcagcgagagt
aagatcgagctgctggacctgtgctctaagaacgagctctctgtcaacctcttctcagaa
gaggacgtagacaactatatgtttgatgatgaggacgaggactccaccctgggcagtgac
gtgtgctcgctgaagatccgctacgagtccttccaggacaacatccgagaaaagaccaat
gccattcaggaggaaacccagttcaacttcttcccaagtgtcgtggccaaaaaggagggc
gaaggagcagtgaagaagggagctgaagggccgcaggtgaagggagagatagttgaagtc
tgggcggctggagaaaaggttgacaaaaacaacagcagcagctctgctgaagtgaccccg
aatgtcagtccagagagcagctacctgtttgacttcaacaattccacagtcgactctgga
gagtacagcgatgacagctcctgtactggatcctcccttgacacctgccagactaaacag
aaacactgcttcctctccagggagaactccagctcctctagccagctgagctatgggctg
aggtccaagagaaaagtcagatacagcgatgactatctgtacgacgtggactctatcgag
agtgagaggaacacagagaaaaaagacaagcagacggtgggtccaaagaaagaggaggat
gatgactggtgtccaaagaagaggagaaaatcctcacgaaaagagcctccggtgataatc
aaatacatcatcataaaccgatttaaaggggagaagcacatgttagtaaagcttggcaaa
attgacacatcagagacaacagtaagcttaagtaaggacttagttcataagtaccagaga
atggcccctctgaaagattactggcaaaagaggcggcaggaaatgcaggagcagcgcatg
ctggctgctggtgataaaaacacatttccaaatggctgcaggcgttcccttaattcgagc
ctgacaaaacgaaaatacaggattgcaaatagagtccggattcaaagaattcacgctgta
aagctttcgccaaaccacaccgatcacaagcaagaggtgggcgcagctgaggatgaggct
gcctgtacagatatggaatctatatcaacaacgacctccgactgtgctgctagattagac
caaggcagtgtgacaggaaaaagcagattgctagagagggaggggaaaatacttgggaat
aagaatgtgcaaataaggaagtttaaaagcgaggccagactgaggttgaaaaaaatgaaa
gaggctcagcaggaggatggtaaaactgtgatacacctacaagaggttggcccactatcc
ccaaatcggaaccctgacatagtttactccaccgcaggcagcccccagctttgtgatgac
tccactgtcagtgtcgaccccaatgaaaagtcaatttttataccagccccctgctcccct
tccagtacaatgacccatcctgtaaatgtgaatagtggtctacatgtcatccctggaggc
tacctgcagacattactagatgcctccgactcatccagtaacactgggctgacatattac
tcccagcagcatcagcagcatccccgacagcagtttcctcatggcctctcccaggaagag
aatccattcactaacctacagctggcccagagctgtgttctatcccctccctcagagtcc
gagctccaacaatccccctctaactgctccaatcagatggagccaaacttcactcacaca
tcatggcagtctggaggtgaacagttaccatttacacctgatattccacctgaatctgct
ggtttttccagcacaatctctttgccaatgacaaacaacttgtcattgtcaggatatagt
caagtcaatgtagatggcaacagactgctgtatgataaggcatatttgcctgaggagcca
ccaggactagactcaggtctacaggtcagccagtcagctgaagaggaacaggtgcagttc
catagagtcactctaaacacagagaatggcaggctggccagctatgactctatgagttca
ctgtctgccacctccagcagctacagctctatgagtctcaagtcctgtgagaaggagagt
gaagaggatgtgaacgagaacttcttggcccactgcagtcccaaactggtgatccagcaa
agtacggatgaaatcactcccctcagggagtccacagacctactggacatctccaacttc
acccccgataagttcaggcactcgccgctgtcagagatgtcgccacccgacacaccaaat
ctctccccacaggtgatggggacagaaattagagaaagcctaggaaaggccagggagttt
cagggagagacaggagacatgactctctcagctacacctgatgggactaagtgggactgt
aatgtcctgccacaacaaaatcatgatggcagagcgataaacaatcatcagttccagttc
catactttcaatgacaatgatggcacaggtaagattgatggcatggacgtctttgatgag
caggccgaatccatcggaggtcgaactaaaggtcccaagtcaaaaaggaaaacaaccagc
aaacagaaaaccaagggtccaagggcccccaagacagagaagaacaaagcccctagacag
aattctagttcatccaaaaagctaaaagccctgcttgatgcaaaggcgaatgcaaaaggt
gaagaaagtgaaggcctttttggactgtcagaagactggcctttactggaggagcacggt
gggggctgggcagacggcaacaacaacagtcctgtggatgacgaccagcgagagtttgaa
gagccctccaacatcctgtccaacatagcctctgggatggcagaggtccagaggtttatg
aaggtgtccatcgagccactgtgggaccccatgtctggactctgtcagcctccagatgcc
aacagccttaaaactaagacacttaaaatcctggcgggaacgacagctaatgtcaggaaa
aagggtggttatgccacctcccctgtggtaggaaggggcaggaaggcaactggcatggga
gccaaaaaccaagccaagttaattccttcaaaccccttcttcccccctctcatgctagac
tgcaacatattcaacaagtccagcctcggtatacctggcatctgtgggcccgcacacaaa
aaaatgtaccgtcacaaaaccggtgccaaatttgctcgagacgaaaacaatacagggaag
cgggactcgagcaagaacacagctctgatggcctcttatgagaaactgaggtaa
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