Coregonus clupeaformis (lake whitefish): 121573651
Help
Entry
121573651 CDS
T08357
Name
(RefSeq) repulsive guidance molecule B isoform X1
KO
K06847
RGM domain family member B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121573651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGM_C
RGM_N
C8-3_MUC4
VPS51_Exo84_N
Rhabdo_M1
Motif
Other DBs
NCBI-GeneID:
121573651
NCBI-ProteinID:
XP_041741724
LinkDB
All DBs
Position
18:52530456..52600688
Genome browser
AA seq
533 aa
AA seq
DB search
MARLQLEAGEAELQFQRRLSSLQANQSQQLHQGLRHAYSQFQNEIQQSVCDPLRDILSGY
DALVISASEAALGDLLSAFERNQSELREALQALTPSQEEGQCQVATPQCRIQKCTTDFVS
LTSHLTPALDGFDVEFCKALRAYSACTQRTAKSCRGNLVFHSAVLGISDLMTQRNCSRDG
PTSSTHPEIQSEPCNYHSRTQHAHTHPHTHTHPHTHTHTHTQPGYLFCGLFGDPHLRTFE
DSFQTCKVEGAWPLIDNDYLSVQVTNVPVVTGSSATATNKITIIFKPFEECTDQRVYQAV
TDDLPAAFVDGTVSSGAPDHNLNGNNVDSTGKVRALWISEHSPGRHVELHAGYIGVTVIV
RQLGRYLTLAVRIPEEMAHAYDATQDLQLCLNGCPTSERIDRGGHLSLPLPLPRLALGLQ
LQQPQGEGQPSHTHSHTAPYSAPQGFSVEDARARCREQLEVQDIYFHSCVFDLLTTGDAN
FTAAAFSALKDMESLHPHRERWTIYPPSSAHTSQPITWLLLLTLCIACFCVCV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcacggctccagttagaggctggggaggcggagcttcagttccaaaggcggctgtcc
tcattgcaggcgaaccaatcacagcagctccaccagggtctaagacacgcctatagccag
ttccagaacgagatccaacagagtgtgtgtgatccactacgagatatcctatctggttat
gatgcattggttatctctgcatcggaggcggcccttggtgacttactgtcagcatttgag
aggaaccaatcagaactgagagaggctcttcaggctctcacaccgtcacaggaagaaggt
cagtgccaggtggccacccctcagtgtcgtatccagaagtgcaccacagactttgtgtcc
ctgacgtctcacctgaccccagcgctggatggctttgacgtagaattctgtaaggctctg
agggcctacagtgcctgcacacagaggacagccaagtcctgcaggggcaacctggtcttc
cactctgctgtcctgggtatctcagacctcatgacccaaagaaactgctcccgtgacggg
cccacctcctccacacaccccgagatacaatcagagccctgcaactaccacagccgcacc
cagcacgctcacacacaccctcacactcacacacaccctcacactcacacacacactcac
acgcagccgggctacctgttctgcgggctgtttggggacccacacctgcggacgtttgag
gacagcttccagacctgcaaggtggagggggcgtggccgctcattgataatgactacttg
tccgtgcaggtgaccaacgttccagtggtaactggatccagcgccacggcgaccaataag
atcaccatcatattcaagccctttgaggagtgtacagaccagcgtgtgtaccaggcagta
acagatgacctgcccgctgcctttgtagacggtaccgtgagcagcggggcccctgaccat
aacctgaacggaaataacgttgactctaccgggaaggtacgagcgctgtggatctcggag
catagccctggtcgccacgtggagctgcatgccggctacatcggcgtgacggttatcgta
cggcagctggggcgctacctgaccctggcggtgcgcatcccggaggagatggcccatgcc
tacgacgctacgcaggacctgcagctctgcctgaatggatgtcccacctcggaacgcatc
gaccgggggggtcacctgtccctgcctctccctctaccacgtctagccctgggcttacag
ctccagcagccacaaggcgagggccagccctcacacacacactcccacacggctccctac
agcgccccccaggggttcagtgtggaggatgcgcgggcacgctgcagggagcagcttgaa
gtgcaggatatttatttccactcgtgtgtgtttgacctcctgaccaccggggatgctaac
tttacggcagcagcgttcagcgccctgaaggacatggagagtctccacccccaccgcgag
cgctggacgatctacccacccagctcagcccacacctctcagcctatcacatggctccta
ctgctcacactctgtatagcgtgtttttgtgtgtgtgtgtaa
DBGET
integrated database retrieval system
