Coregonus clupeaformis (lake whitefish): 121573657
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Entry
121573657 CDS
T08357
Name
(RefSeq) glutamate receptor 3 isoform X1
KO
K05199
glutamate receptor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121573657
04082 Neuroactive ligand signaling
121573657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121573657
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121573657
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
121573657
NCBI-ProteinID:
XP_045078413
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Position
9:7647080..7791327
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AA seq
890 aa
AA seq
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MGHRIIATVLFFVWLFGKSHGAFPNQINIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEK
PFHLNYNVDNLESSNSFSVTHAFCSQFSRGVYAIFGFYDQKSMNTLTSFCGALHTSFITP
SFPTDADVQFVIQMRPPLRGAVLSLLAHYKWEKFVYLYDTERGFSILQAIMESAVANNWQ
VTARSVGRIVDPTEYKRIIEEMDRRQEKRFLIDCEVGRINTILDQVVTLGKNSRGYHYIL
ANLVSLQGFANMSLDKVFAGGANITGFQIINPENPIVTQFLQRWERLDEREFPEAKGTPL
KYTSALTHDAVLVLAEAFRYLRKQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQV
QGMTGNIQFDSFGRRSNYSIDVYEMKIGGPKKTGYWNEFEKYVYIVDAQVTNESSSVENR
TIVVTTIMESPYVMYKRNYLSLDGNDRYEGYCVDLAAEIAKHVGIRYKLSVVADGKYGAR
DPETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPG
VFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLDENDEAKDPQSPPDPPNDFG
IFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSP
IESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTPEGVAR
VRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVNLAVLK
LSEQGILDKLKNKWWYDKGECGTKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMTVALI
EFCYKSRAETKRLNLAKNAQNFKPAPPANTQNFATYREGYNVYGTESVKI
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcgcataatagcgactgtccttttttttgtgtggctttttggtaaatcgcat
ggagcgtttccaaaccagataaatataggtgggctttttatgcgctctacagtgcaggag
cacagcgccttcagattcgctgtccagctgtataataccaatcaaaatgtgacggagaaa
cctttccatctcaattataatgtagacaacctcgaatcctccaacagcttttccgtcaca
catgcgttctgctcccagttctccagaggagtgtatgccattttcggcttctacgaccag
aagtccatgaacacgctgacctcgttctgtggggctctacacacctcctttatcacaccc
agcttccccaccgatgccgacgtgcagtttgtcattcagatgaggcctcctctacgggga
gctgtcctcagcctgctggcccactacaagtgggagaagtttgtctacctctacgacacc
gagagaggtttctctatccttcaggccatcatggagtcagcagtggccaataactggcag
gtgacggcccggtcggtgggcagaatagtggaccctacagagtacaaacgtatcatcgag
gagatggaccgcaggcaggagaaacgcttcctcatcgactgtgaggtgggaagaatcaac
accatcctggaccaggtggtgaccctggggaagaacagcagaggctaccactacatcctg
gctaacctggtttcactgcagggcttcgctaacatgagcctggacaaagtgtttgctgga
ggagccaacataacaggcttccagatcatcaacccagagaaccctatagtcacacagttc
ctccagcgctgggaacgcctagacgagagggagtttcccgaggctaagggcacaccactg
aagtacacgtcggcgctgacccatgatgccgtgctggtcctggcagaagccttccggtac
ctgcggaagcagagggtggacgtgtcccggagggggagcgctggggactgcctagccaac
ccggccgtgccctggagccaaggcattgacattgagagagccctcaaaatggtccaggta
caaggtatgacagggaatatccagtttgactcgttcggtcggagatccaactacagcatc
gatgtgtacgagatgaaaataggggggcccaagaagaccgggtactggaatgaattcgaa
aaatatgtatatattgtggatgcgcaggtcaccaacgagtcctcttctgtggaaaaccga
acgattgtggtcactactattatggaatctccttatgtgatgtacaagcgaaactacttg
tcgctggatgggaatgacagatatgaaggctactgtgtcgatttagctgccgaaattgca
aaacatgtggggataagatacaaactgtcagtagttgcggacgggaagtatggtgcaagg
gatccagagaccaagacgtggaacgggatggtgggtgaactggtatatgggagagctgat
atagcagtggctcctctaactataacattggtacgagaggaggtgatagacttctctaag
ccttttatgagcctggggatctccattatgataaagaagcctcaaaagtcaaagccgggc
gtgttctccttcctggacccactggcctatgagatctggatgtgcatagtgtttgcctat
atcggcgtgagcgtggtgctcttcctggtcagccgcttcagcccctatgagtggcatctg
gatgagaacgacgaggccaaagacccccagagccctccagacccacctaacgactttggg
atttttaatagcctgtggttctccctgggcgccttcatgcagcaaggatgcgatatctcg
ccaaggtctctgtcgggcagaatcgtggggggggtgtggtggttcttcaccctcatcatc
atctcctcctacacagccaacctggctgccttcctcacagtggagaggatggtgtctccc
atagagagtgctgaggacctggccaagcagacagagattgcctacgggaccctagactca
ggctccaccaaggagttctttaggcgctccaaaatagcagtttatgagaaaatgtggtct
tacatgaaatcggctgaaccgtcagtgttcgcaaagaccacaccagaaggggttgctcga
gtgcgaaagtcgaaaggcaaatttgcctttcttctcgaatccacaatgaacgagtacatt
gagcagcggaaaccttgtgacaccatgaaagtgggcggcaacctcgactctaagggatac
ggtgtggcaacacctaaaggatcagcattaagaactcctgtaaaccttgcagtattgaaa
ctcagtgaacaaggcatcttagacaagctgaaaaacaaatggtggtacgataagggtgaa
tgtggaaccaaggactctggaagtaaggacaagacaagtgctctaagcttgagcaatgtg
gcgggagtcttctatattctggttggagggctagggctggctatgaccgtggctttgata
gagttctgttataagtcacgggcagaaaccaaaagactgaatctggctaagaatgcccaa
aactttaaaccagctcctccggcaaacacccagaattttgccacataccgagaaggctat
aatgtgtatggaacagagagtgttaaaatctag
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