Coregonus clupeaformis (lake whitefish): 121573658 Help Entry 121573658         CDS       T08357                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03013   Nucleocytoplasmic transport cclu03040   Spliceosome Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     121573658   09122 Translation    03013 Nucleocytoplasmic transport     121573658  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cclu03019]     121573658    03041 Spliceosome [BR:cclu03041]     121573658 Messenger RNA biogenesis [BR:cclu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      121573658 Spliceosome [BR:cclu03041]  Complex C   Other components    EJC/TREX     121573658  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     121573658 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  121573658 NCBI-ProteinID:  XP_045078418 LinkDB All DBs Position 9:complement(7792951..7875693) Genome browser AA seq 1578 aa AA seqDB search MCGIVGKMATRIIPADWIKNWEKSGKHEFVQLCKNLADKTNHDSTIKDIQAALYELCWHV IQGNFKLDLAASVLCDMMELQDDMPSILADVFSILDIETSSLEEKNKRDRYTQLVGACLF FVPDAILKERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLI TELGQDLSGNITSHVVLESIKSLIGCFNLDPNRVLDIILEVYECRSDQDEFFLPLIKSYM CEPLTLCHILGFKFKFNQEPNEETPTSLYHIAAALLHHNLIELEDLYVHLMPLDASIVEE HKREITEAKQIARKLTMVVVPSEKTEDKEREKEKEEEKNDKPPDNQKLGLLEALLRIGDW HHAQSIMDQMPAFYATSHKAIALALCQLLHLTVEPLYRRAGVPKGAKGCLMRPLRNKRAP RPAESFEDLRRDVFSMLCYLGPHLSHDPILFAKIVRLGKGFMKEYQSEGRNDNVKDKMDT LLSCFLSIADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYTSHPLL VKVKAQTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLIGPVV DSLKYLTSLNYDVMAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELA GLLQYVTNTLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQMEAMTGGEQLKAEGGYFGQ IRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVVFLEGGEKHLKLVGKLYDQCHDTLV QFGGFLASNLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYGHQILSKYDELKKAEK SNRQQQKVHKYVAACELVMSPVHEAVVSLHPPRVWDDLRPQFYATFWSLTMYDLAVPHNA YDREVKKLQVQVKAIEENPDVPMNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKL EKDNWLLAKSTKNETITKFLQLCLFPRCIFSAIDAVYCARFVELVHQQKTPNFCTLLCYD RVFSDIIYTVASCTENESRRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTIFRATG FDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILSCYPKVL NLGQALECRVHKICLEEKEKRPDLYALAMGYSGQLKGRKAHMVPENEFHHKEQPMRSTTP VSQQNGPGTTAKPATNASKTEEGVSEDADRSKDKSQGTAKPVNKANSTAAKVTTSNGNGA PNSTKAIKERDDKEKSGKEKKEKKEKTPGSTPETKGESRREKQRDERGAVGKEERAPREG KEKTPKADRDKQKAEEKSSKEDKAKAGNGEPKEPSRERDTGAKESKSKEKGGDRSAVSGS LKSPVPRLESAESERDHKRRKLDTHSSPSHSSSVKDNSNEPKDSASKHHINYNSVARSKS SERETDKKESENARGRSKEKKTEDKDRKDRKRDHMTTDREMSLESKRRKDENGTNSSNKH SKSASPSSDSPVSADKEKTKRSKSSSKEKGESAKPERNSSGGKKESRHDKEKSEKKEKRD SSGGKDEKKHHKSSDKHR NT seq 4737 nt NT seq  +upstreamnt  +downstreamnt atgtgtggtattgtggggaagatggcgacacgtattatccctgctgattggatcaaaaac tgggaaaaatctggaaaacatgagtttgtacaactatgtaagaatcttgcagacaaaaca aatcatgacagcacaataaaagatatacaggctgctttgtacgaactctgctggcatgtc attcaggggaacttcaagctggaccttgctgctagcgtcctatgtgacatgatggaactg caggatgacatgccatccattttagcagatgttttcagtatactagacatagagaccagt tctttagaggaaaaaaacaaacgagaccgttacacccagctagtgggagcctgtctgttc tttgtgccagatgccatcctgaaggagaggctggacccagagaccctggagtccctggga ctcataaagcaagcccatcagttcaaccagaaaatcgtcaaaatcaagaccaaactattt tacaagcagcagaagttcaacttgctgagggaagagaatgagggctatgccaagctgatc actgagctgggccaagacctctcaggcaacatcaccagccacgtcgtcctagagagtatc aagtccctaataggatgcttcaacctggaccccaaccgcgttctggacatcatcctggag gtgtacgagtgtcgctctgaccaagatgagttcttcctgcccctcatcaagtcctacatg tgtgaacccctcaccctctgccatatcctgggcttcaagttcaagttcaaccaggagccc aatgaggagacccccacgtcactctaccacatcgctgccgccctcttgcaccacaacctt atagagctggaggacctctatgtgcacctgatgccactggatgccagcattgtagaggag cacaagagagagatcacggaggccaagcagatcgcccgcaagctcaccatggtggtggtg ccctccgagaagacagaggacaaggagagagagaaggagaaagaggaggagaagaacgac aagcctcctgataaccagaagctggggttgttggaagcgctgctgaggatcggagactgg caccatgcccaaagcattatggaccagatgcccgccttctatgccacctctcacaaggcc atcgccctggcgctgtgccagctgctgcatctgactgtggagccgctgtaccgcagagcc ggggtccccaaaggggccaagggatgtttgatgaggcccctgaggaacaagcgggccccc aggcctgccgagagctttgaggacctgcgcagggacgtgttcagcatgctctgctacctg ggaccccacctctcccatgaccccatcctctttgccaagatagtacgcctgggcaagggc ttcatgaaagagtaccaaagtgagggtagaaatgacaacgtcaaggacaaaatggacaca ttgctgagttgtttcctgagcattgcagaccaggtgctgctgccctcgctctctctcatg gagtgtaacgcctgcatgtcagaggagctctggggcctcttcaaactcttcccctaccag cacaggtaccggctatacgggcagtggaagaacgagacttacacaagccacccacttctg gtcaaggtcaaagctcagactgtggacagagccaaatacatcatgaagcgattgaccaaa gagaatgtgaaaccatctgggcgccagattggcaagctgagccatagcaaccccaccatc ctctttgactatatcctgtctcagatccagtggtatgacaacctcatcggtccagtggta gactcccttaaatacctcacctcactcaactatgacgtcatggcctattgcatcattgaa gcgctggcaaatccagagaaagagaagatgaaacatgacgacactacgatctcctcctgg cttcagagcctggccagtctgtgtggagcagtgttcaggaaatacccaatcgagttggcc ggcctcctccagtatgtgaccaatacgctgaaagcagggaagagttttgacctgctgatt ctaaaagaggtggtgcagaagatggccggcatcgagatcactgacgagatgacgtcagag cagatggaagctatgactggaggggagcagctcaaagctgagggtggttactttggtcag atccgtaacactaagaagtcgtcccagcgtctaaaggatgccctgttggaccatgatctg gccctgcccctctgtctcctcatggcccagcaacgcaacggggtggtctttctggagggg ggcgagaaacacctcaaactggtgggcaagctgtacgaccagtgtcacgacaccctagtg cagtttggtggcttcctggcctccaacctgagtactgaggactacatcaagcgtgttccc tccattgacatcctctgtaaccagttccacactccccacgacgctgccttcttcctttca cgccccatgtatggacatcagatcctgtctaagtatgatgagctgaagaaagctgagaag agcaaccggcagcagcagaaggtccataagtacgtggctgcgtgcgagctggtgatgtcg ccggtgcacgaggccgtggtgtccctgcacccgccccgtgtctgggatgacctccgaccc cagttctacgccaccttctggtcgctgaccatgtacgacctggccgtgccacacaacgcc tacgaccgcgaggtgaagaagctccaggtccaggtcaaggctatcgaggagaaccctgat gtgccgatgaacaagaagaagaaggagaaggagcgttgcacggccctacaggacaagctg caggaagaggagaagaaacagttggagcacgtccagagggtcctgcaccgcctcaaacta gagaaggacaactggctcctcgccaaatccaccaagaatgagaccatcactaagttcctg cagctgtgtctgtttcctcgctgtatcttctctgccatcgacgctgtgtactgtgcccgc tttgtggagctggtgcaccagcagaagacccccaacttctgcaccctgctctgctatgac cgggtgttctctgacatcatctacacggtggccagctgcacggagaacgagtcgcggcgc tacggacgcttcctgtgctgcatgctggagacggtgacccgctggcacagcgaccgcgct gtctacgagaaggagtgtggtaactacccaggcttcctgaccattttcagagccacaggc tttgacggagggaacaaagcagaccagctggactatgagaacttcagacatgtggtgcac aaatggcactacaagctgactaaagcatcagtccactgcttggagacgggggagtacacc cacatccggaacatcctgatcgtgctgaccaagatcctgtcctgctacccaaaagtgctg aacctgggccaggcgctggagtgccgcgtccacaagatctgtctggaggagaaggagaag aggccagacctctatgccttagccatgggctattctggccagttgaaaggcaggaaggcg cacatggtccctgagaatgagttccaccacaaggagcagccgatgaggagcaccacccct gtcagccagcagaacggccctggcaccacggccaaacctgccaccaacgccagcaagact gaggagggagtcagcgaggacgccgatcgatccaaggataaatctcaggggacggcgaag ccggtgaacaaagccaacagcacagcggccaaagtgaccaccagcaacgggaatggtgct cctaacagcaccaaagccatcaaagagagggatgacaaggaaaagagcgggaaggagaaa aaagagaagaaggagaagactccaggcagcactccagagaccaagggggagagccggcgg gagaagcagagggatgagagaggagcagttggcaaggaggagcgggcgccacgtgagggt aaggagaagacgcccaaggcagaccgggacaagcagaaggcggaagagaagagcagcaaa gaggacaaggccaaggccggcaacggagagcccaaggagccatccagggagcgcgacact ggagccaaggagtccaagagcaaggagaagggaggagacaggagtgctgtgtccgggtcc ctcaagtctccagttccccgattggagtctgctgaatctgagagggatcacaaaaggcga aaactcgacacccactcttcaccatcccattcctcctctgttaaggacaatagcaacgaa cccaaggactctgcatccaagcaccacatcaactacaattcggtcgcgcggtccaagagc agcgagagggagacggacaagaaagagtcagagaatgcccggggccgttccaaagagaag aagaccgaagacaaagaccgaaaggacaggaagagagaccatatgaccactgaccgtgag atgagcctagaatccaaacgcagaaaagatgaaaatggaaccaattcctccaacaaacac agcaagagcgccagtccctcctcagactccccggtctcggctgacaaagagaagaccaag aggtcaaagtcctccagcaaggagaagggagagtctgctaaacctgagaggaactcctcc gggggcaagaaggagtcaaggcatgacaaagaaaaatctgagaagaaggagaagagggac agcagcggcggaaaggatgagaaaaaacatcataagtcctctgacaagcacagataa

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