Coregonus clupeaformis (lake whitefish): 121573659
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Entry
121573659 CDS
T08357
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121573659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121573659
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121573659
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
121573659
NCBI-ProteinID:
XP_041741735
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All DBs
Position
9:complement(7876330..7891940)
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AA seq
1273 aa
AA seq
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MIAAQELHTEFQFPQEADTQLSSDTDLEDPDVKNAKLGKGKGGKKGKKAPGDKGKGGAAK
CVGLGRVNGHHQENGMESMTLFEVVKMGKSATQSIVDDWIESYKNDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
VRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHRGPEEEGMPRRGRQSLNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKTQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLLEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYIILWHLAKVSDGSSTKGDMVTLRKQMRAFCLMCQRYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSGREQLEALIYTPDSSLQAELLNFILDHVFIDQDDDNNST
DGQQDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRGSSIRSKKAKPASTGKRK
LPEAEESSSCSTDAVWMNQEQNVQTPVMMPSPHLTSTVLRDPKKMRPEESYMGIYAMTSE
QQQHQQLPPQQHHHQIPMDYNTQVTWMLAQRQQAEARQQQERASMQYAKMRSHMQNSIRR
GSGLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPS
SIMDDSVLNVSMF
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaagagttgcacacagagtttcagtttcctcaagaggctgatacacag
ttgtcctctgacacagaccttgaggaccctgatgtcaagaatgcaaagcttgggaaagga
aagggtgggaagaaggggaagaaagcccctggagataagggaaagggtggtgcagcgaag
tgtgttggccttggccgggtgaatggccaccaccaggagaatgggatggagagcatgacc
ctgttcgaggtggtgaaaatggggaagagtgccacacagtccatcgttgatgactggatt
gagtcttacaagaatgatcgagacattgctctcctggacttgatcaactttttcatccag
tgctcaggctgtaaaggtgctgtcagtgcagagatgttcagacacatgcaaaactctgag
atcattaggaagatgacagaggaatttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcataatctatgacgagtacatgatggacacagtcatctcgctg
ctcacgggcctgtctgactcgcaggtccgagccttcagacacaccagcacactggcagcc
atgaaattgatgacagccttggtgaatgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtatgaggcagagaggaacaaggtcatggccaagagggccaacgatagg
ctagagctcctgttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcaatttttaaaggagtgtttgttcacagatatcgcgatgccatagctgaa
gtccgggcaatctgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgttggatggaccatgcatgacaagcaaggagaagtg
cgtctcaagtgtctgactgcgctccagggcctgtactataaccgggagctcaacactcga
ctggagcttttcaccagccgcttcaaggatcgcattgtgtcgatgactctggacaaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgaaagtgtctaccatctggtctactctgcccatcgacct
gtggctgtggctgcaggagagttcctctataagaagctcttcagccatcgaggtccagag
gaggaggggatgcccaggaggggcaggcagagcctcaacggaaacctcattaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagcctg
tgggagtgtgcaggggagctgcttaaagactgggagagcatgatcagcctgctgctggat
gagcccatgccaggggaggaggccctgacagaccaccaggagactgccctgatcgagatc
atgctgtgtgccatccgccaggcctgtgagtgccacccaccagtgggcagaggcactggg
aagagggtcctgacagcgaaagaaaagaaaacccagctggatgaccggacgagaatcact
gagatctttgctgtggcgttgcctctgttgttggccaagtactccgttgatgctgagaag
gtgaccaacttactgcagctaccgcagttctttgacctggaaatctacaccactggtcga
ttggaaaagcacttagagtcgttgctgcgtcagatcagggaggtggtggagaagcacaca
gagactgacgtgctggaggcgtgctccatgacctaccacgctctctgcaacgaggagttt
accatcttcaacagggtggacatcgccaggtcccagctactggacgagctggtggacaag
ttcaacagactcctggaggacttcctgctggagggtgaggaaccagatgaggatgatgcc
taccaggtcctgtccacactaaagaggatcactgctttccacaatgcacatgacctctct
aaatgggacctgttcaccagcaactataagctactaaacacaggacttcagaatggcgat
atgcctgagcagattgtaattcatgcgatgcagtgcacacactacatcattctgtggcac
ctagccaaggtctccgatggcagctctacaaagggggacatggtcaccctgaggaagcag
atgagggccttctgtctgatgtgtcaacgctacctcaccagtgtcaacaccactgtcaaa
gagcaggccttcaccatcctgtgtgatgccctgatgatcttcagccaccagatcgtgtca
tcgggccgggagcagctggaggctctgatctacacgccagactcctccctgcaggccgag
ctgctcaacttcatcctggaccacgtctttatcgaccaagacgatgacaacaacagcaca
gatgggcagcaagatgatgaagcgagtaaaatcgaggccttacacaagaggcgtaacctg
ctggcagcgtactgcaaactgatcatttacaatgtggtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaacgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcatactgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagagaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccccagggagagggaaaccctcctctcaaccttgccttcctggacattctcagc
gagttctcctccaaacttctccgtcaggacaagaagacagttcacctctacctggagcgg
ttcatgaccttccagatggccctgcagcgagaggactgctggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtctgttatcagcggctacagc
agccgaggttccagcatcaggagcaagaaggccaagccagccagcaccggaaagaggaaa
ctgcctgaagcagaggagagtagcagctgcagcacagatgcggtgtggatgaaccaggag
cagaacgtacagacgccagtgatgatgccctcgccacatctcacctccactgtgctgagg
gaccccaagaaaatgaggccagaggagagctacatgggtatctacgctatgacatcagag
cagcagcagcaccaacagctgcccccccagcagcatcaccatcagatccccatggactac
aatacccaggtgacctggatgctagcccagagacagcaggcagaggcccggcagcagcag
gagcgggccagcatgcagtacgccaagatgaggagccacatgcagaactcaatccgccgc
ggttcaggactcatggaggacgatgaggagccaatagtagaggatgtaatgatgtcgtca
gaggaccgtttggaagatctcaatgagggcatggatttcgacactatggatattgatctg
ccaccatcgaaaaatcgcagagagagatcagagctgaagccagactactttgatccttct
tccatcatggatgattcggtcctcaatgtttcaatgttctaa
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