Coregonus clupeaformis (lake whitefish): 121573661
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Entry
121573661 CDS
T08357
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121573661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121573661
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121573661
Endosome - Golgi transport
Arf GTPase associated proteins
121573661
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121573661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_6
RA
PH_3
PH_8
GAP1-M
Motif
Other DBs
NCBI-GeneID:
121573661
NCBI-ProteinID:
XP_041741740
LinkDB
All DBs
Position
9:7964613..7977664
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AA seq
1132 aa
AA seq
DB search
MADQEDSLQAMQNCFRSQFSVEEVECEDIEAYRRTPSVDEDSIYLACTLSRSYDPGDSDL
HNTPVIKMGWLDKTPPQGSLIFQKRWVMLDAQYLRYFQNEKEVYSKRIIAIPSVNEVLNV
GEQKFEVVTRNRTFLFRAENNTVREEWVSVLKETIQQHRNSMEMSLMNFSFTSGQCDSGV
SLVSKQGYLEINGLRSKVYVVICADRVFLYGNAEEYSQGVGITSIEMNVGTVKSTDKRSF
NLTTFYRTFSFLAESAQQRDQWVVALQACVSRSLSSDVVAHKIWAEKANQRCADCGAPHP
DWASVNLCVVLCKCCAGVHRGLGQSVSKVRSLRMDETVWTDNLIQVFLLGNNRVNLFWAA
NMPPSEALHPSSDSEKRQRFITAKYCQGKYRRYHALFGQQEALNKALCSTVQTGDVLETL
SLVFCGADVNCYTGDPELPSPVSMAQHYGQILQVEFLTHNHNTELPGSRAGDHTLLEAAF
PVSHTGYLFKTASSIRPVTEHKAKGDFSRRWCSLNQGNFSYYESEKSSSQRGGMKMSDVL
CLLVNPLGKHGYAHSFELYHDSGKVYLFGEDSSDKVRGWIKAIAKALVPSAAEDLVCWSF
ERVGQLRYTEGQSLHCPRLGWFSLGGSRLRLLLHGADRVENIDLRKIKELSIEQEAGAGA
VVLVDRGRSLRVEGVRRPDFQGWLSGLKQGSGRGEGPLEQQQLTDTDIPVIVDRCMSYIT
QHGLKSEGIYRRCGVNSRIAALLFFLRHDARQVRLSEGERQVDDVANVLKRFLREVGDGV
FNGYQASLQWLHTTTVSEMSERVSKYQALLHSLPPVNRATLGAVINHLYCIQCFANENQM
NMHNLAIVFGPTLFQTDGTDKSAGQVVEDLIQNYQDIFNVDAEQLQRQLDMISHVIKAQE
EHAEEGSPSPLTICGVYLERKAEGSELLVQISQEVSAAELVGKVLRRRNIPPQQGDYWSC
FLVSDNQEIERPLHYQERVLTIYFSLGKDCHLVVKRNCYMEAILINIAGKVDVSRNGLIK
FCEEKRQRGKGTFSRRLCVLSGVSLRLYKEVKSSQPERECPVHALKVYCGIKKKLQPPSC
WGMTVVCEKAVRDIQQWYLCCESKKELIEWLATFMSLQHDGDLWPAASRLDS
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaggaggattcattgcaggccatgcagaactgcttccgcagtcagtttagt
gtggaggaggttgagtgtgaggacattgaagcatacaggagaacaccatcggttgatgaa
gacagtatctatcttgcctgcacactgtcacgatcatacgaccctggagactctgatctt
cacaacactcctgttatcaagatgggttggctggacaagaccccacctcaggggagcctt
attttccagaagcgttgggtgatgttagatgcacagtaccttcgatactttcaaaacgag
aaggaggtctactcaaagcggatcatagccataccgtctgtcaatgaagtgcttaacgtt
ggagagcagaagtttgaggtggtgacaaggaacaggactttcttgttccgtgctgaaaac
aacactgtcagggaggaatgggtgtcagtactgaaagaaactattcagcagcatcgtaac
agcatggagatgtcccttatgaacttcagttttaccagtggacagtgtgatagtggagtc
tctctcgttagtaaacaaggatacctggagattaatggactgcgctccaaagtctatgta
gtcatctgtgcagacagggtcttcctctacgggaacgctgaggagtacagccagggtgtt
ggcatcacctccattgagatgaatgtgggtactgtgaagagcacagacaaacggtccttt
aacctcaccaccttctacaggacattcagttttctggccgagtcggcgcagcagagagat
cagtgggtggttgccctgcaggcctgtgtcagtcgctctctgtccagtgacgtggtggcc
cacaagatctgggctgagaaggccaaccagcgctgtgctgactgtggcgccccccaccca
gactgggcctctgtcaacctctgtgtggtcctctgcaagtgctgtgcaggcgtgcacagg
ggtctgggccagagtgtgtccaaagttcgcagtctgaggatggatgaaacagtgtggact
gataaccttattcaggtgttcctgttaggtaacaacagggtaaacctgttctgggcagct
aacatgccaccaagcgaggcgctccacccatcaagtgatagtgagaagcgccagcgcttt
atcactgctaagtactgtcaggggaaataccgccgctaccatgctctgtttggccaacag
gaggccctcaacaaagctctgtgcagtaccgttcagacgggtgatgttttggagactctg
tctctggtgttctgtggagcagatgtgaattgttatacaggtgatccagagctgcccagc
cctgtgtccatggcccaacactatggacagatactacaggtggagttcctcactcacaac
cacaacacagagctgccagggtctagggctggagatcacacactcctagaggctgctttc
cccgtctcacacactggttatctcttcaagaccgcttcctcaatacggccagtaacagag
cacaaagcaaaaggagattttagtcgtcgctggtgctctctgaaccaaggtaacttcagc
tactatgagagtgagaagagctccagtcagaggggagggatgaagatgagtgatgtcctg
tgtctgttggtcaaccccctagggaaacatggttatgcccattcctttgagctgtaccat
gactctgggaaagtctatctatttggagaagactcctctgacaaagtgagagggtggatc
aaggccatcgccaaggcgctggtcccatctgcagcagaggacctggtgtgctggtccttt
gagagggtgggccagttgcgctacactgagggccagagcctccattgccctcgcctgggc
tggttctccctggggggctccagattgcgcctactcctccacggagcagatcgagtggag
aacatcgacctgcgcaaaataaaggagctctccattgagcaggaggctggtgctggtgct
gtggtgctggtggacagaggcaggagcctgcgtgtggagggggtcaggaggcctgacttc
cagggctggctgagtgggctcaagcagggctcagggagaggagaaggccccctggaacag
cagcagctcactgacacagacatccctgtcatcgtggaccgctgcatgagctacatcaca
cagcatggtttgaagtcagagggcatctatcggaggtgtggtgtgaactccaggattgcc
gccctactgttctttctccgccatgatgcccggcaggtccgtctgagtgaaggggagcgc
caggtggatgacgtggccaatgtcctgaagaggttcctcagggaagtgggagatggtgtt
ttcaacggctatcaggcctctctgcaatggctccacaccactactgtcagtgagatgagt
gagagagtgtccaagtaccaggccctcctccacagcctccccccagtcaacagagccact
ctgggggctgtcatcaaccacctctactgcatccagtgctttgcaaatgagaatcagatg
aacatgcacaacctggccattgtgtttggtcccacgctcttccagacggacggcactgat
aaaagcgcaggacaggtggtagaggatctaatccagaactaccaggacatcttcaatgtg
gatgcagagcagcttcagaggcagctggacatgatctctcatgtcatcaaagcgcaggag
gaacacgctgaggagggaagcccctcacctctcaccatctgtggggtttacctcgagagg
aaggcggagggctctgaactgctggttcagatctcccaggaagtgagtgctgcggagctg
gtaggtaaggtcctgagacgcaggaacatccctccacagcagggggactactggagctgc
ttcctggtcagcgacaaccaggagatagagcgtccattgcactatcaggagcgagtgctg
accatctatttctctctgggtaaagactgtcatctggtggtcaagaggaactgctacatg
gaggccattctcatcaacatagcaggcaaggtagatgtgtcaagaaacggtctgatcaag
ttctgtgaagagaagcgtcaacggggtaagggaaccttcagcagacgcctctgtgtgctc
agtggcgtgtctctaaggctgtacaaagaagtaaagagttctcagcctgagagggagtgt
ccagtccatgctctgaaggtctactgtggtatcaagaagaagctacagccaccgtcatgc
tgggggatgactgtagtgtgtgagaaggcagtacgagacatacagcaatggtacctgtgc
tgtgaatcaaagaaggagctgatcgagtggctggccacttttatgagcctccagcatgat
ggtgacctgtggccagcagcttccaggctagattcttga
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