Coregonus clupeaformis (lake whitefish): 121573697
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Entry
121573697 CDS
T08357
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121573697
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121573697
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121573697
04090 CD molecules [BR:
cclu04090
]
121573697
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Nectin family
121573697
CD molecules [BR:
cclu04090
]
Proteins
121573697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
I-set
Ig_2
PDGLE
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121573697
NCBI-ProteinID:
XP_041741798
LinkDB
All DBs
Position
9:9108893..9185104
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AA seq
576 aa
AA seq
DB search
MEDGSTFKMFMPCLRNYPLHKRQNAVFMFLLYSLTGVGGSQVLVPQKVSAVLGKNVTLGC
SVKVEANLSLTQSSWERRLPTGSVTVAVYNPVFGISIPPDYVRRLSFRSPSSHDATIVLE
DVGFADIGVYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSVALIDEGNETVVATCIAE
RARPPAEVSWETDLFGQSEVTLQDEANGTTSTQVHYLWHPTRHIQGQALTCVVRHPALHT
DFRIPYQLNVQYAPDIVVVGYDGDWHVGRESVQLTCKAKANPPAHYFRWIRLDGDMPEGV
EMVNNTLLFLRPLQRNDSGVYRCEVANDINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGS
ASSSYSTSVGDKRRVLFTSPTLAALPPANQLGTIVSGAVGGALFLLLLLVLGGVCYLRQR
QTFRGDYYTKQYLGPSDMQKAPPQHELHPTKPANNVYFDKDREEWGDCERIHERDRERLH
LHPTSTTIMNNHNHREPERQANGRTRVMRNGEHHDHDHLRSYPSPHQTGHARYAAPPHPL
SNGSPYLSDDCCDSGAEGDYVSHTDGSVISRREWYV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggatctactttcaaaatgttcatgccttgcctcaggaattacccgcttcat
aagagacagaatgctgtatttatgtttcttctgtacagcttgacaggtgtggggggcagt
caggttctggtgccccagaaagtgagtgctgtattggggaagaacgtgacattgggctgt
agcgtgaaggtggaggccaacctgagtcttacccagagttcctgggagcgccggctgccc
acaggctcggtgacggtggcggtgtacaaccctgtgttcggtatctccatccccccggac
tacgttcgccgcctgtccttccgctccccctcctcccatgacgccaccatcgtgttggag
gacgtgggcttcgcagacattggagtgtacacctgcaaggtggccaccttccccctgggc
aacacacaggcttccaccaccgtcagtgtgctcgtggagcccaaggtgtatgtgtcggct
ggctcggtggctctgattgatgagggcaatgagacggtggtggctacctgcatcgctgag
cgggcccgcccccccgccgaagtatcctgggagacggacctgtttggccaatcagaggtg
acgctgcaggacgaggccaacggcaccaccagcacccaggtgcactacctgtggcatccc
acccgccacatccagggtcaagccctcacctgtgtggtgcgccaccccgccctgcacaca
gacttcaggatcccctaccagctcaacgtgcagtacgccccagacattgtggtggtaggt
tatgatggtgactggcacgtgggccgcgaaagcgtccagctgacctgcaaagccaaggca
aacccaccagcccactacttcagatggatcagactggacggggacatgccagagggcgtg
gagatggtgaacaacacattgctgtttctgaggcccctccaaaggaatgactctggagtc
tacaggtgtgaggttgccaatgacatcaacctacgcagcagggacctgcggatacgcata
caagatcctcccaccacctccatgccctccaccacccctgcgcctgtccttactggctct
gcctcctcctcctactccacctctgtgggagacaagcgacgggtcctcttcacttccccc
accctggcagccctgcccccagccaaccaactgggcaccatcgtgagcggagctgtgggc
ggagccttgttcctcctgctgctgctagtgctgggcggggtctgttacctccgacaacga
cagaccttccgcggggactactacaccaagcagtacctagggccttcagacatgcagaag
gctcctccacagcacgagctccaccccaccaagcctgccaataacgtttactttgacaag
gaccgcgaggagtggggcgactgcgaacgcatccacgagcgggaccgcgagcgcctccac
ctgcatccaacatcaacaaccatcatgaacaaccacaaccacagagagccagagcgccag
gccaatggccgcactagggtgatgaggaatggagaacaccatgaccacgaccacctgcgt
agctaccccagcccccaccagacaggccatgccagatacgctgccccgccacacccgctg
agcaacggctccccctacctatcggatgactgctgtgacagcggggccgagggggactat
gtctcccatacggatggctcagtgatctcacgcagggagtggtacgtctga
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