KEGG   Coregonus clupeaformis (lake whitefish): 121573718
Entry
121573718         CDS       T08357                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121573718 (zc3h12b)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     121573718 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 KH_N4BP1_1st Regnase_1_C zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 121573718
NCBI-ProteinID: XP_041741839
LinkDB
Position
9:10228435..10237792
AA seq 973 aa
MVLELAVPANAGPLLHRSIQHIERIFRVRVSYGSAESNCDSTHVSTSNIIIVRVAEGEED
DCTKAKDYIVSLISPAHRKRERLTLALHKQLAALKSAIEYDSQAVVEVREHVVDISGGER
NVMTAWSTVEKIKMEKHPCREEAPELTEAQQPSGESEEGSSSESESEQQHQLQVNSGSCK
RKEPFSATKPHRQLCRSPCLDRPSFSQSSTLPELRPDDTKAAAVLKHASDKEYQTKMEFA
LKLGYSGEQVETVLNKLGAAALINDILAELVRLGNKGEPEVQASINTGTFISRGGPCVKE
AVSPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFVEKGHKDIT
VFVPAWRKEQSRPDAPISDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAK
CGTGPTTAKGDSGSEAKRVAPKRQSDPSIRSAACEPEERLSAVRKPEANSVPSLVSALSV
PTMQPAKSHAAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPHPPILVTNSHGASVTYS
EQFPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGIYQRNPSQHCPEPCLS
HSNSDSFSSYGELYMSSVDSSLDESMKGQQSPAQNRLQAFSHGGFHHEALTRVQSYGPEE
PKQGPSGKQSISHLAPHVQHPVVGARSSCPGDYPLPQNVLPSQSSQPGRSLGMTRMDSIS
DSRLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMQPCCERVMVRSMP
DKMEQIWRSPWENPPQAEHQERHVIPEHQYQTYRNLCNIFPAFVVHSVMEKNPHLMDPQQ
LAAVIVTKLRSCH
NT seq 2922 nt   +upstreamnt  +downstreamnt
atggttttggagctggcagtgcccgcaaatgcaggcccattgcttcaccgctccatccag
cacattgagcgtattttccgggtgagggtcagctacggatccgctgagtcaaactgcgac
agcacacatgtcagcaccagcaatataatcatagttcgtgtcgcagagggcgaggaagat
gactgcaccaaggcaaaagattacatagtgtccttaatttcaccagctcacagaaagaga
gagcgtctaacgttggctttacacaaacagctggctgcgctgaagtcagccatcgagtat
gattctcaggctgtggtggaggtgagggagcatgtggtggacatctcaggtggtgagagg
aacgtgatgacggcatggtcgacggtggagaagatcaaaatggagaaacacccatgcagg
gaagaggcccctgagctgactgaggcccagcagcccagtggggagtcagaggagggaagc
agctcagagagcgagtcagagcagcagcatcagctgcaggtgaacagcggcagctgtaag
aggaaagagcccttcagtgccaccaagcctcaccggcagctctgtcgctctccatgcctg
gaccggcccagcttctcccagagcagcactctaccagagctccgccctgacgacaccaag
gccgccgcagtgctcaaacatgccagcgacaaggagtaccaaaccaagatggagtttgcc
ttgaagctgggatactcaggtgaacaggtggagacagtgctgaacaagttaggggctgct
gcccttatcaatgacattctggctgagcttgtaaggcttggtaataaaggagaaccggaa
gttcaagccagcattaacaccggcacgttcatctcccgtggaggcccctgtgtcaaagag
gctgtcagtccggaggtgtcactggaagatgattccgtggatccttatgataatctcagg
cccatcgtcattgatggatcgaatgtggcgatgagccatggaaacaaagaggttttctct
tgccttggtatccaattggctgttgattggtttgtggagaaaggacacaaagacatcaca
gtgtttgttcctgcctggaggaaagagcagtcgaggcctgatgcccccatttcagaccaa
gacattttgcggaagctagagaaagaaaagatcctagtgttcaccccatctagaagagtc
cagggaaggagagtggtgtgctacgatgatcgcttcatagtgaagctggcctgtgactct
gatggcattattgtgtcaaatgacaactacagggacttacagaacgagaagccggagtgg
aagaagttcatagaggagcggctgctgatgtactcgtttgtcaatgataaattcatgcca
cctgatgatcctttaggaagacatggtccaagtttagagaatttcctccgcaagcgtcct
gttgttccagagcataaaaagcaaccctgtccatatgggaaaaaatgcacttatggacat
aagtgcaagtactatcacccagagcgtgcaaaccagccccagcggtcagtggctgatgaa
ctgagggcgtttgccaagttgtctgctgtgaagacaatgagtgagggggccctggccaag
tgtggcactggacccaccacagctaagggggacagtggctctgaggctaaacgtgtggcc
cctaagcgccagtctgatcccagcatccgctcagcggcctgcgagccagaggagagactg
tctgctgtccgtaagcctgaggcaaattctgtgccttccctcgtgtctgccctcagcgtg
cccaccatgcagcctgccaagagccacgcggctggtgccttgaacacgcgatcagccagc
agcccagtgcccggctccctccagttcacccacagctccctggagcacatgtctagtgta
cagtacccacacccacccatcctagtcaccaacagccatggtgcttctgtcacttacagt
gaacagtttcctaagtacgattctgtgagcacagaccacggatactactctatgcttagt
gatttttctaacatgagcatgagcagcatgcacaatgtggacagcttctgtagcatggag
catgagcacgggatttatcagagaaatcccagccagcattgccctgagccctgcctcagc
cactctaacagtgactccttctcctcttatggggaattatacatgagctcagtggacagt
agcctggatgagagcatgaaggggcagcagtctcctgcacagaacagactccaggccttc
tcccatggggggttccaccacgaagcactgacccgggtgcagagctatggccctgaggag
cctaagcagggtccaagtgggaagcagtccatatcccacctggcaccgcatgtccagcac
cctgttgttggggccaggtccagctgcccaggggactaccccttacctcagaatgtcctc
ccgtcacagtcctcgcagccgggacgctccctgggcatgacacgcatggacagcatctca
gactccaggctgtacgagagtaaccctatgaggcagcggagacccccactgtgccgcgaa
cagcacgccagctgggacccgctgccctgcggcagtgaatcctatggataccactcgtac
cccctgagtaacagcctgatgcagccatgttgtgagcgggtgatggtccgcagcatgcct
gacaagatggagcagatctggaggtctccgtgggagaacccgcctcaagctgagcaccag
gagcgccatgtcatcccagagcaccagtaccaaacataccgcaacctctgcaacatcttc
cccgctttcgtggtgcactctgtcatggagaaaaaccctcatctaatggacccacaacaa
ctcgctgccgtcattgtcacgaagctgaggtcttgccattaa

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