Coregonus clupeaformis (lake whitefish): 121573759
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Entry
121573759 CDS
T08357
Name
(RefSeq) PHD finger protein 12
KO
K26244
transcriptional regulatory protein PHF12/RCO1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121573759
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
121573759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHF12_MRG_bd
PHD
FHA
PHDvar_NSD
PHD_2
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
121573759
NCBI-ProteinID:
XP_041741920
LinkDB
All DBs
Position
9
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AA seq
993 aa
AA seq
DB search
MWDKMETPTIVYDLDTSGGLMQQIQALLAPPKSEDGEKRSRKPDKNARRAGRATNHDTCD
SCREGGDLLCCDHCPAAFHLQCCNPPLSKEMLPPGDWMCHRCMVRRKKRELKKEQINGLL
ERQLPKQSSSPAAELELAPGTLRLDPTAAVGGTTGLRATAVAQVRLLERRPSSRPNTPTS
TASTDTPTPSEQNDMDDDMLDVEDDAQGSEPESFSPHLKRPFDLLIAAAMERNPTQFQLP
NELTCTTALPGTSKKRRRDEMTGKNVKRPQHELDHNGLVPLPVKVCYPCGRSCRLAPLIQ
CDYCPLLFHMDCLDPPLTAMPVGKWMCPNHIEHMVLKQRSLTLSGRCQLFDQFQDRMSQH
AIKVDFLQRVHRLNPPVRRGAHTHLKKTLKVPDAIKSQYKCPPAMIAQAGIRNGELICNG
SPESSHQHLTPSQHLTSEDEQQEWLRDVITLQCSIVRHLSAKQKEKLSSEWDSEQMDKAN
IKPCVTAEEGSAVCTSNRTALLASKPKADSTAFCPQGAPALKEGKCSMCTEKPCHNCGPS
NVNSPLEQLARTNGSSEACRQDDLHKLREPSGPDRPVPQTPAASGPELPNHTGRAVVKTE
KTLLRPCAGTASPCTSPFKPDPRGPSPPHRPSQGTEGPALTSISSTAATRALTPPRTPYQ
IKGTTKLGSTAPPAGGKVSLDAVTPRSGSLLPSSFSMGDLSSCLKAVADSHGEIQMSSLD
EKFIKLLAWQRIQQLFGPKAPSPPQSSCISLPLVPQPQPTEAQNKDIQARAVFYPLTGKG
GAVSMCYRSLYIGSGADMNVCLTNYGHCNYVSGKHACIFYDENTKQYELLNYSEHGTTVD
NVLYSCDFSEKTGPSPSSSLVSKVQNIIKRCKRRKQEEEGEPMVLEERVMSQCQGTSRSC
CDCKASSSSLIGGSGAGWEGTALLHHGSFVKLGCMQFVFSITEFACKQPKEETMTTPNTT
STATLQSQEGTEPSDKHISQLHQVPVIQPNPVP
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtgggataaaatggagaccccaacgattgtctacgatcttgacacctctggtggtctt
atgcagcaaatacaagcattgctcgcgcctcccaagtctgaagacggagaaaaaagaagt
cggaaaccagataaaaatgcccggagagcagggagagccacgaatcacgacacttgtgac
agttgcagagagggaggcgacctcctctgttgtgatcattgtcccgccgcctttcattta
cagtgctgcaacccacccctgagtaaggagatgctgccccctggagactggatgtgtcat
cgctgcatggtgcgcagaaagaagcgggagctgaagaaggagcagattaatggtctgctg
gagcgccagctgcctaagcagtcttcctcccctgcagcagagttagagctggccccaggc
accctgaggctggaccccacggcagcagtaggaggcaccacagggctgagggctacagct
gtggcccaggtccgtctcctggagaggaggcccagcagcagacccaacacccccacctcc
accgcctccacagacacccccacgccctcggagcagaatgacatggatgacgacatgcta
gacgtggaggacgacgcccagggctcggagcccgagagcttctccccacacctcaagagg
ccctttgaccttctgatagctgctgccatggagaggaaccccacgcagttccagctcccc
aatgagctcacctgcacaaccgcacttccaggaaccagtaaaaagaggagaagagatgag
atgacaggaaagaatgtgaagcgaccgcagcatgagctggaccacaatgggctggtccca
ctgccagtgaaggtctgctatccctgtggcaggagctgcaggttggcaccattaatccag
tgtgactattgcccccttctgttccacatggactgtctggaccccccacttactgccatg
cccgtgggcaagtggatgtgtcccaatcacatagagcacatggtgctgaagcagaggagc
ctgacgttgagcggccgctgccagctgtttgaccagtttcaggacaggatgtcccaacac
gccatcaaggtggatttcctgcagcgggtgcatcgtctcaacccccccgttcgccgagga
gcccacacacacctgaagaagaccctcaaggtccctgatgctataaagtcccaatataag
tgtcccccggccatgatagcccaggctgggatccgcaacggggagctgatctgtaacggc
agtccagaatcctcccaccagcaccttacaccctctcagcacttaaccagcgaggacgag
caacaggagtggctccgtgacgtcatcacactccagtgcagcatagtgagacatctatcg
gccaagcagaaggagaagctatcgtctgagtgggactctgagcaaatggacaaggccaac
atcaaaccttgtgtaacagcagaggagggcagtgcagtgtgcacttctaacaggacagcg
ttgctagcctccaagcctaaggctgacagtacagcattttgcccccagggggcgcctgca
ctcaaagaaggcaagtgtagcatgtgtacagagaagccttgtcataactgtgggcccagt
aatgttaacagtcccctggagcagctggctcggaccaatgggagttcagaggcctgcaga
caggatgacctccacaaactgagagagccctcgggtcctgataggcccgttcctcagaca
ccagcagcctctggcccagagttacccaaccacactggaagagctgtggtcaagactgag
aaaaccctattaagaccctgtgcagggacagcatccccatgcaccagtcccttcaaacca
gaccccagaggcccctctccacctcacagaccctcccaaggcacagagggccctgctctg
accagtatcagcagcactgcagcgacccgtgccctcaccccacctagaacaccataccag
atcaagggaacaaccaagctgggctccaccgccccaccagcaggtggaaaagtcagtctt
gatgctgtgacccccaggagtggttctctgctccccagctctttctctatgggagacctg
tccagctgtctgaaggctgtggcggacagccacggtgagattcagatgagtagtctagat
gagaagtttattaaactcctggcctggcaaaggatccagcagctgtttggccctaaagct
ccttcccctccacagagcagctgtatcagcctacctcttgtgccacaaccccagcctacg
gaagcacaaaacaaggatatccaggccagggctgtgttttatcctttgactgggaaagga
ggagctgtcagtatgtgctacagaagcctgtacataggatctggtgctgacatgaacgtg
tgccttacaaactatggtcattgtaattatgtgtcaggcaaacatgcatgcatcttctat
gatgagaacaccaagcagtatgagctgctcaactacagtgaacacgggaccacggtagac
aatgtgctgtactcctgtgacttctctgagaagactggccccagcccctccagcagcctg
gtctccaaagtgcagaacattatcaagcgctgcaagaggaggaaacaggaagaggaaggg
gagcccatggtgctagaggagagggtgatgagccagtgtcagggaacttccagatcctgc
tgcgactgcaaggccagcagctccagtctgatcgggggcagtggggcaggctgggagggc
actgccctgctccaccacggcagcttcgtcaagctgggctgcatgcagtttgtcttcagt
attacagagtttgcctgcaagcagcccaaagaggaaactatgactaccccaaacaccacc
tccactgccaccctccagagccaggagggaacagaaccctctgacaagcacatctcccag
ctccaccaagtgccagtgatacaacctaaccctgtcccctag
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