Coregonus clupeaformis (lake whitefish): 121573769
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Entry
121573769 CDS
T08357
Name
(RefSeq) tuftelin-interacting protein 11 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121573769
Spliceosome [BR:
cclu03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121573769
Other components
Complex C specific factors
121573769
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
121573769
NCBI-ProteinID:
XP_041741949
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Position
18:52361579..52375657
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AA seq
853 aa
AA seq
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MDIGPSPHTHRGPAMSMSHLYGRQGEEEEEGVEVEKFEVTEWDLANEFNPERRRHRQTKE
EAVYGIWAERGDSDDERPSFGGKRSKDYSAPVNFVSAGLRKSAAEDKQQQQSGGGSDDSD
NDNTPPAPPRDTAPKKLQTGGNFRGNSQSQRTGFAAGIRAGGDMGTWEKHTKGIGQKLLQ
KMGYIPGKGLGKNAQGILNPIEAKLRKGKGAVGAYGNERTKQSLQDFPVVDSEEEEEKEF
QRELGQWRRDPVGGGGKKKPKYSYRTVEELKANGKLAGRTTQTPAGELAQVKVIDMTGRE
QKVYYSYSQMTNKLSVPEEAPMSVAAREQKTSGFALPELEHNLQLLIDLTEQDILQSSRR
LQHERDVVVTLSHESSSLQTRLGTERDAIQRLEAVLQLVDRFQSGETAPGVGPSLQECAG
IFATLQSDFFEEYKTLGLGDLAAAVVHPLIREKLRTWDPLKDSSYGLEEVGQWRAILESG
QLHHANAPEAHMDPYHRLLWEVWIPVLRVCVSGWQPRMVGPMVDCVEVWAPLLPLWILNY
LLEQLIFPRLQREVDSWNPLTDTVPIHSWLHPWLPLLQSRLEPLYPPIRSKLANALQRWH
PSDGSARLILQPWRDVFTPGAWEAFMVKNIIPKLALCLGELLINPHQQQMETFNWVLDWE
GMLSPSSLVSLLDKHFFPKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDAVLAQPLVKD
KFNEALDIMNRAVSSSLGGGYMQPGARENIAYLTHTERRKDFQYEALQERRDAESVAQRG
IGASLPTNFKDLIQTKAEENNIVFMPLVAKRHEGKQLYTFGRIIIYIDRGVVFVQGEKTW
VPTSLQSLIDMAK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatattggaccctctccccacacacacagaggcccagccatgtctatgtcccatctg
tacggacggcagggagaggaggaagaggagggggtggaggtggagaagtttgaggtgaca
gaatgggacctggccaacgagtttaacccggagcgccgtagacacagacagaccaaagaa
gaggccgtctatggcatctgggcagagaggggtgactccgacgatgagagacccagcttc
ggagggaagcggtctaaggactactctgccccggtgaattttgtgagtgctgggctgcgt
aagtctgcagcagaggacaagcaacagcagcagagtggtggagggtcagacgactctgac
aatgacaacaccccccctgcgccaccccgcgacaccgcaccgaagaaactgcagacgggt
ggtaatttccgtggcaacagccagtcccagaggactggatttgcggctggtatccgggct
ggaggagacatgggcacttgggagaaacacacaaaggggattggccagaaactcctccag
aagatgggctacataccagggaaaggactggggaagaacgcacagggtattttaaacccc
atcgaggcaaagcttcgtaaggggaaaggggcagtgggtgcctacggcaacgagagaacc
aaacagtcattacaggacttccctgtggttgactctgaggaggaggaggagaaggagttc
cagagggagctaggtcagtggcgtagggatcctgtgggtgggggagggaagaaaaaacct
aagtattcctacaggactgtagaagagctgaaggctaatggcaagctggctggacggacc
acacagacacccgctggagaactggctcaggtcaaggtgatagatatgacaggcagggaa
cagaaggtgtattacagctacagtcagatgactaacaaactcagtgtaccagaggaggct
ccaatgagcgtagccgcacgtgagcagaagacgtctggctttgccctgccagagctggaa
cacaacctgcaactactgatcgacctgacggaacaagacatactacagtcctcgcggcgt
ctgcagcatgagcgtgacgtggtggtgactctgagccacgagagctccagtctgcagact
aggctggggacggaacgagacgccatccagaggctggaagcagtactgcagctggtggat
cgctttcagagtggagagactgcacctggggtgggacccagcctgcaggagtgtgctggt
atctttgcgaccctacagagtgatttctttgaggagtataagactctaggtttgggagat
ctggctgctgctgtagtacatccacttatcagagagaaactacgcacatgggaccctctc
aaggatagttcatatggtctggaggaggtgggtcagtggcgagccatcctggagtctggt
cagctacaccacgccaacgcccctgaagcacacatggacccctaccacaggctgctgtgg
gaggtgtggatcccggtgctgcgagtgtgtgtgtcggggtggcagcctcgtatggtagga
cccatggtggactgtgtggaggtctgggcccctctgctgcccctctggatactaaactac
ctcctggaacaactaatcttccccaggctgcagagagaggtggatagctggaaccccctg
acggacaccgtgcccatccactcctggctccacccctggctgcctctgctccaatcacgg
ctggagcctctgtacccacccatccgcagtaaactggccaatgcactgcagcgctggcac
ccgagtgacggctctgcccgcctcatcctccaaccatggagagacgtgttcacgcccggt
gcctgggaggccttcatggttaaaaacatcatccctaaactagctctgtgtctgggggag
ctgttaataaatccacaccagcagcagatggagacgttcaattgggtgttggactgggag
ggcatgctgtctccctcaagccttgtatcactgctggacaaacacttcttccctaagtgg
ctacaggtgctgtgttcgtggctcagtaacagtcctaactatgaggagattactaagtgg
tacctgggctggaagtccatgttcagtgatgctgttctggctcagccactcgtcaaggac
aagttcaatgaagctctggacatcatgaaccgcgctgtctcctctagcctaggtgggggg
tacatgcagcccggtgcccgtgagaacattgcttacctcacacacacagagcgtcgtaag
gacttccagtacgaggctttgcaggagcgccgggacgctgagagcgtggcgcagcgtggc
atcggtgccagcctgcccaccaacttcaaagacctaatccagaccaaggctgaggaaaac
aacatcgtcttcatgccgctggttgccaaacgccacgagggcaaacagctgtacaccttt
ggacgcatcatcatctacatcgacagaggagtggtctttgtacagggagagaagacctgg
gtccctacgtccctacagagtctaatcgatatggccaagtga
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