Coregonus clupeaformis (lake whitefish): 121573853
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Entry
121573853 CDS
T08357
Name
(RefSeq) nuclear pore complex protein Nup155
KO
K14312
nuclear pore complex protein Nup155
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121573853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121573853
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121573853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
121573853
NCBI-ProteinID:
XP_041742130
LinkDB
All DBs
Position
9:42064494..42086292
Genome browser
AA seq
1386 aa
AA seq
DB search
MPSAMGPSTPAAALAEALESSGRIIDQHLQEDRCFPDLSELLNVPSHNMPSLSGGSDMDY
PLQEPGLLSVPNLPELSAVRRVPLPPELVEQFSHMQCNCMMGVFPEICRAWLTIDNDIFM
WNYEDGGDVAYFDGLSETILSVGLVKPKAGIFQPHIHFLLVLATPVDVVILGLSFPKAQA
GLNDSMSGGMQLLPDPLYSIPTDNTYHLAITSTDLGRIFLAGKDGCLYEVAYQAEAGWFS
QRCRKINHSKSSLSFLVPSLLQFSFSEDDPVVQIAIDNSRNTLFTRSEKGVIQVYDLGTD
GQGMSRVAAMSQSSIAAAAGNIARTIDRSVFKPIVQISVIDRFESSDCHLLAVTHAGVRL
YFSTTPFAPPHAKHPVARPNLLALVHVRLPPGFSASSTLQKPAKVHKALYSKGVLLMTAS
ETEDSDILWCINHDSFPFKKPLMEAQMMSNVDGHSWALCAIEEEKAPKISTPLNNDQVPL
TASPVVVQQHNVPPQKFVLLSAKGSHIFHKLRPVDQLRHLLVSSAGGESEEVERFFKLHR
EEQACATALILSCSSAASDREVSQWATRAFFRYGGEAQMRFPSSHSAPSNVGALFGSPVP
GSPMPVGSSPMPNPSFLATPAPGMMPQSVSTPYVPPLPSAPITGMSSGPEVVFSGKHNGI
SVYFTRILGNIWDGSLAVEKIIIKGNQAVSILESTACSSHLESVLLELRGLKDFLDKNSQ
FSPSSLGAASFSSPANLQQRLLGFMRPDGGASSQQELQRKYHTEAQVYEKMSLQCIQQLV
HRSCQTLALWKLLCDHQFSHVISELPKEFQDQVKGVSFKDVVIRGRELSGALITALINVY
IKDSASVDSISTHLRDICPLLYSNDDSVCSKANELLQGSRQIQTRTDKERTLRESLQLYQ
LISHHTDLPLVCSQYRQVRFYEGVLELCLTAADKKDPQRLGPHFYKNGEPEEDQAGALAF
QERLSCYKCITDTMQELVNQSKAAPQSPSVPKQPGPPVMTSDPNMLSNEDATAHFEQIIG
LAQKSQDELFHIALYNWLIQADLTDKLLEVNSPYLEEHLMHMIKQEQSKVRNMDLLWRYY
EKSRSFGKAAHVLARLADMLSTEISLKQRLEYISRAILSAKSSSCISAQGAEGEFLHELE
EKMEVVRIQVQIQDTLSRQYSKHPSVQGAVSQLDSELMDITKLYGEFADHFRLSECKLAI
IHCAGHSDPILVHSLWQEIMETELGDGVAMSPADRMRALSLKLVSLGKIYAGTPRYFPLE
FLVKFLEQEVCRLNWDVGFVTFTMQEIGVQLPRLLEVYDQLFKTRDPCWQRLKKPLHLVE
CIHVLLSGYVEDPSKVPTYDRRRFTNVCLDNICGYLVELQSLSPNSALQLTIGNFKALQA
KLEKVH
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgccatgggacccagcactcctgctgctgccctggccgaagcgctggagagc
tctggtcggatcatagaccaacaccttcaggaagaccgctgcttccctgacctctcagag
cttcttaatgtcccctctcacaacatgccatctttgtctggggggtcggacatggactac
cctcttcaggaacctgggctgctcagtgtgccaaacctccctgagctcagtgcagtccgc
agggttcccctacctcctgagctggtggagcaattcagccatatgcagtgcaattgtatg
atgggagtttttcctgaaatctgtcgggcgtggctcaccattgacaacgatatcttcatg
tggaattatgaggatgggggggacgttgcatattttgacggcctcagtgaaaccatcctg
tccgtggggctggtcaaacctaaagcagggattttccagccacacatccacttcctgttg
gtcctagccactcctgtggatgtggtgatcctggggctcagcttccctaaagctcaggca
gggttgaatgacagcatgtctggagggatgcagttgctcccagacccgctgtactccatc
cccacagacaacacctaccacctggccatcacctccaccgatctgggacgcatcttcctg
gcagggaaagatggctgcctgtatgaggtagcctaccaggccgaggcaggctggttcagc
caacgatgcaggaagattaaccactccaaaagcagcctgtccttcctcgtcccctctctg
ctccagttctccttctctgaggacgacccggttgtgcagattgccattgacaactctcgt
aacactctcttcacccgctcagagaagggggttatacaggtgtatgacctgggtacagat
gggcagggtatgagccgtgtggcggccatgtcacagagttctatcgcagctgcagcagga
aacattgccaggaccatagatcgctctgtgtttaaacccatcgtacagatctctgtgata
gacagatttgagtcctccgactgccacctgctggctgtcactcacgcaggagtgcgtctc
tacttcagcaccactcccttcgccccaccacatgccaagcacccagtggcacgccctaat
ctgctagctctggtccatgtccgcctgcctccaggcttctctgcctcctccaccctgcag
aagcctgccaaggtccacaaggctctgtacagcaaaggagttctcctgatgacagcgtct
gagactgaggacagtgacatcctgtggtgtatcaaccatgactcatttccctttaagaaa
cccctgatggaggcccagatgatgtccaatgtagatggccactcctgggcgctatgtgcc
atcgaggaggagaaagcacctaaaatctctacccccctgaataatgatcaggttcccctc
actgcctctcctgtcgtggtgcagcaacacaatgtccctccacagaagtttgtccttctt
tctgccaagggaagtcacatcttccacaagttgcggccggtggaccagctgcgccaccta
ctggtgagcagtgctggtggagagagtgaagaagtcgaacgcttcttcaaactgcacagg
gaggagcaggcatgtgccactgctctgattctgtcctgctccagtgctgccagcgacaga
gaggtgtcacagtgggccaccagagccttctttagatatggaggagaggctcagatgagg
ttcccctcgtctcattctgctcctagcaacgttggagcgcttttcggctctcctgtacca
ggttcccctatgcctgttggtagcagccccatgcctaaccctagtttcctagctacgccg
gctccaggtatgatgccccagagtgtgtctacgccctatgtaccacccttgccctccgcc
ccaatcactggcatgtcctctgggccagaggtggtcttctcagggaaacacaatggcatc
agtgtctacttcacacgcatactgggtaatatctgggacgggagtcttgctgttgagaag
ataatcatcaaaggaaaccaggctgtcagtattttggagagcacagcctgctcatctcat
ctggagtcagttcttctggagctccgtggtctgaaggacttcctggataagaactcccag
ttcagcccctcatctctgggtgcagccagtttcagctccccagccaatctgcagcagcgg
ctgctaggtttcatgcggcctgatggaggagccagttctcagcaggaactccagaggaag
taccacaccgaggctcaggtctatgagaagatgtccctgcagtgtatccagcagctggtg
catcgctcctgtcagaccctggccctgtggaagctgctgtgtgaccaccagttcagccac
gtcatctctgaactacccaaggagttccaggatcaggtgaagggggtgagttttaaggac
gtggtgatccggggtcgggagctgtccggagccctgatcacagccctcatcaacgtctac
atcaaagactctgcctctgtagattccattagcacccacctcagagacatctgcccccta
ctgtacagcaatgacgacagcgtctgctcaaaggctaatgagttgctgcagggctccaga
cagatccagactaggacagataaggagagaacactgagagagtcactacagctctaccag
ctgatcagccatcacacagacctgccactggtctgctcccagtacagacaggtgcgtttc
tatgagggggtgctggagctgtgcctgactgcagcggataagaaggatcctcagaggctg
ggacctcacttctataagaatggagagccagaggaggaccaggctggagcactggccttt
caggagaggttgtcatgttataagtgcatcacagataccatgcaggagctggtgaaccag
agtaaagctgctcctcagtctcccagcgtccctaagcagccaggaccccctgtcatgacc
tctgaccccaacatgctgagcaatgaggacgctaccgcccactttgagcagattattggt
ctggcccagaagtcacaggatgaactcttccacatagccctctataactggctgatacag
gctgacctcactgacaagcttctggaggtgaactctccttacctggaggaacacctgatg
cacatgatcaaacaggagcagagtaaggtgcggaacatggacctgctgtggagatactat
gagaagagccgcagctttggcaaggcagctcacgtcctggccaggctcgctgacatgctc
agtactgagatctctctgaagcagaggctggagtacatctccagggccatcctgtcagcc
aagagctcctcctgcatctctgcccagggagctgagggggagttcctgcacgaactggag
gagaagatggaggtggtccgtattcaggtccagatccaggatactctgagcagacagtac
tccaagcatccctctgtacagggagctgtgtcacaactagattcagagcttatggacatc
accaagctgtatggggagtttgcagatcacttccgtttgtctgaatgcaagctggccatc
atccactgtgcgggccactctgatcccatcctggtgcactctctgtggcaggagatcatg
gagacggagctgggtgacggtgtggccatgagtccagccgacaggatgagagctctgagt
ctcaaactggtgtctctgggaaagatctatgctggaacacccagatacttccctctagaa
ttccttgtgaagtttttggaacaggaggtgtgtcgtctgaactgggacgtgggcttcgtc
acgttcaccatgcaggagatcggcgtacagctgccccgtctgctggaggtctacgaccaa
ctcttcaagacacgggatccgtgttggcagcgtctgaaaaagcctctccacctggtagag
tgtatccatgtgctgctgtcaggatacgtagaggatcccagcaaagtaccaacatatgac
cgacggcggttcactaatgtgtgtctggataacatctgtggttacctggtggagctgcag
tccctgagtcccaactctgccctgcagctcaccatcggcaacttcaaggccctgcaggcc
aagctggagaaagttcactga
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