Coregonus clupeaformis (lake whitefish): 121573860
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Entry
121573860 CDS
T08357
Name
(RefSeq) rapamycin-insensitive companion of mTOR isoform X1
KO
K08267
rapamycin-insensitive companion of mTOR
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121573860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121573860
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
mTORC2 complex
121573860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RICTOR_N
RasGEF_N_2
RICTOR_V
RICTOR_M
RICTOR_phospho
Motif
Other DBs
NCBI-GeneID:
121573860
NCBI-ProteinID:
XP_041742141
LinkDB
All DBs
Position
9:complement(41880973..41899387)
Genome browser
AA seq
1732 aa
AA seq
DB search
MAVSIRGRPSRSIRMRGRNDSGEEHVPLDLSRDPSDNLREILQNVAKQQGVSNMRKLGHL
NNFIKLLCNVGHSEEKLGFTHEEIIICLRLALLNEAKEVRAAGLRALRYLIRDSAILQKV
LRLQVDYLIARCIDIQQSNEVERTQALRLVRKMITVNALLFPSSVTNSLIAVGNDGLQER
DRMVRACIAIICELALKNPVVVAQRGGLSTILKNVIDCQLSRMNEALITTILHLLNHPHT
RQYVRSDVELEQILAPYTDFHYRHNADTPEGQLKEDREARFLASKMSIVASFRSWSGIIN
LCKSGNSGIQSLIGLLCIPNMEVRKGLLEVIYDIFRLPMPVATADFMEALVSVDPSRFQD
NWRLSDGFVASEAKVILPHRARSRPDLMDNYLALVLSAFIKSGLLEGLVEVITSTDDTIS
VRATILLGELLHMANTILPHSHSHHLHCLPTLINKAASFDIAQEKRLRASAAVNYLKHFH
EKKKRGPKPNSLYLDHIICKSKASHYCRDQHFRTQRDIFVIKDTEDALMMNLRDSHILNH
KENLDWNWVLIATILKWPNVNLRSNKDEQMHKFVRRLLFFYKPSSKLYGSLELDHSKARQ
LTVVGCQFIKFLLESEEDGQAYLEDLIKDIVQWLSSSSGLKPDRSLQSNGLLTTLSQHYF
LFLGTLSSHPHGIKMLEKCSVFQCLLNICTLKNQDHLLKLTVSILDYSRDGLSRVILSKI
LTAATDNCRLYATKHLRVLLRANVEFFSNWGIELLVTQLHDRNKTISMEALDTLDEACED
KANLHALIQMKPALTHLGDKGVLLLLRFLSIPKGFSYLNERGYVTKQLEKWQKDYNLKYV
DMIEEQLNEALTTYRKPVDGDNYVRRSNQRLQRPNVYLPVHLYGQLVHDKTGCHLLEVQN
VVPDLSYTVRSPMLDKWEGIKQLKAALWALGNIGSSNWGLNLLQEEGVIPDIVVLALHCE
VLSIRGTCLYVLGLISKTRQGCDMLKQHGWDAVRHSRRTLWPVVPDDMEPPPNPPSLLSS
VPSSLSLASDSTSSRHNSESDSTQPSMYIMDDERLENCDLSDDPPMYMRPKYKDRSPFTL
LASSRFRNHLLHSLSLSGKMLRSTSDPKGTTRDHGGGMEGEQGRKRTVTEPSYTFGSSDV
FPIYNDGHLPKSPSANLETSIVGSKASENQDSTPSFGEGEEDGEGEGRLPGRSVGVGGSG
VGENQREQTSRERLAGDGPSGGGGGAPFKSRSQSFNTDTTTSGISSMSSSPSRETLPSTI
DTDGVSLNSVISAKTIQTLTSLTPQPHTTHLSSLSKSSSASLVPPGSSHTLPRRAQSIKS
PSLTTLSGLTDCSLMYSNSRDALGYATLKYATSCDTYASQRDALGYATLKRLQQQRIHSS
LSHSEALASPAKDVLFTDTITMKTGSLDSRLTPRWFLKALSFASLDKEDLLSPISQSTLQ
RCSSVRSMLSSATYGSSDDFIGLALPVDINNMFQIKETPYFQKRTSPPSEDRSAKFFSGD
SDGPSPHSRHAVLRSQLSITELMGVSRAEQQKLLGSEETGLQEHNDDNCLYCTGLSVLGF
SASNSSPDLTEEPPFSEWCDPPVQNHLEVMGQTKLSGVSGCSDAVSQGSPGSIRSTELVL
GVKSIPEESPAGRVLLRKEVLRLVVNLSSSVGTKGHETNLLTIKEKFPYAFDDICLYSEV
SYLLAHCMFRLSARRFIQELFQDVPFIPMYEEAESILSKLPKNGPADPPPEP
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcagcatccgaggccgtccgagccgaagcattcggatgcgaggtcggaatgac
agtggggaggaacatgtaccactcgatctttccagagatccttcagacaaccttcgggaa
atccttcagaatgttgccaagcaacaaggagtctccaacatgcgcaaactcggtcacctg
aacaacttcataaagcttctctgcaatgtaggccactcagaggagaagcttgggtttaca
catgaagagatcatcatttgtctccggttagcactgttgaatgaggctaaggaggtgcga
gctgcaggcctgagggctctccgctacctgatcagagacagcgctattctccagaaggtc
ctccggcttcaggtagactacctgatcgccaggtgcatagacatccagcaaagcaatgag
gtggagaggacacaggctctcaggctggtgcgaaagatgatcactgtgaatgcactgctc
ttcccctcgtctgtcaccaactccctcattgccgtgggcaacgatgggctacaggagcga
gaccgcatggtacgcgcctgtatcgccatcatctgtgaacttgctctgaagaaccctgtg
gtggtagcccagaggggtggtctcagcaccattctgaagaacgtgatcgactgtcagctg
agccgcatgaacgaggcactcatcactaccatcctacacctcctcaaccacccacacaca
cgccagtatgtgcgctcggatgtggagctcgagcaaatcctggccccttacactgacttc
cactacagacacaatgcagacacgccagaggggcagctcaaggaagacagggaggctcga
ttcttggccagtaaaatgtccatagttgcttcctttcgctcctggtcaggcatcattaac
ctgtgcaagtcaggcaactctggaatccagtctcttattggcctgctctgtataccaaat
atggaagtaaggaaaggcttattagaggtgatatatgatatcttccggctccccatgccg
gttgcgactgcagactttatggaagcacttgtcagtgtggaccctagtaggttccaagac
aattggaggttatcagatggctttgtggcttccgaagcaaaagttatccttccacatcga
gctcggtcaaggcctgacttaatggataactacctagcgttggtactgtctgccttcatc
aagagtggacttcttgagggtctcgttgaggttatcacaagcactgatgacaccatctct
gtgcgagccaccattctactgggagaactgcttcacatggccaacaccatcctgccccac
tcccacagccaccacctgcactgtctgcccacactcatcaacaaggcagcctccttcgac
atcgctcaggagaagagactacgggcgagtgcagcggtcaactacctgaaacatttccat
gagaagaagaagagaggacccaaacccaacagcctgtacctggaccacatcatctgcaaa
tcgaaggcttctcactactgtagagaccagcactttagaacacagagagatatctttgtc
attaaggacactgaggatgctctcatgatgaacctgagagacagccacatcctcaaccac
aaagaaaacctggactggaattgggttctcatcgcaacaatattgaagtggccaaatgtt
aacctgcggagcaataaagatgaacaaatgcacaagtttgtgcgcaggctgctgttcttc
tataagcccagcagtaagctgtacggcagcctggagctggaccacagtaaggccaggcag
ctcactgtggtgggatgtcagttcatcaagttcctcctggagtctgaggaggatgggcag
gcgtacctggaggacctaataaaggacatagttcagtggctctcctcttcctcagggctc
aagcctgaccgcagtctccagagcaacggcttgctcaccactctcagccagcactacttc
ctgttcctgggcactctctcctcacacccgcacgggatcaagatgctggagaagtgcagt
gtcttccagtgcctgttgaacatctgtactctgaagaatcaggaccacctgctgaaactc
actgtctccatactggactacagccgtgacgggctgtccagggtcattctgtccaagatc
ctcactgctgccactgacaactgcaggttgtatgccactaaacacctgcgggtgctgctt
cgtgccaacgtggagttcttcagtaactggggcatcgagcttctggtcacccagctccac
gaccgcaacaagaccatctccatggaggcgctggacacactggacgaggcctgtgaggac
aaggcaaacctccatgctctgatccagatgaagccagctctcactcacctgggggacaag
ggggtcctgctgctgctacggttcttgtccattccaaagggcttctcctacctcaatgag
aggggttacgtcaccaagcagctagagaaatggcagaaggactataacctgaagtatgtg
gacatgatagaggagcagcttaacgaggctctaaccacgtaccgcaagcctgtcgacgga
gacaactatgtacgccgaagcaaccaaaggttacagaggccaaatgtttatcttcctgtg
catctgtatggccagcttgtccatgataagacaggctgccatctactggaagtccagaat
gtggttcctgacctaagctacactgtccgttccccaatgctggacaagtgggagggcatc
aaacagctaaaagcagcactttgggccttgggtaacatagggtcgtcaaactgggggttg
aacctcttgcaggaggagggggtgatccctgacatagtggttctggccctgcactgtgag
gtcctctccatcagggggacgtgtctgtacgtgttggggctgatctcgaagacacgtcag
ggctgtgacatgctgaagcagcacggctgggatgctgtaagacacagccgccggacgctg
tggcccgttgtcccagacgacatggagcccccccccaaccctcccagcctgctgtcctct
gtcccctccagcctcagcctggcctctgactccaccagctctagacacaacagcgagagt
gactccacacagcccagtatgtacatcatggatgatgagaggctggagaactgtgacctg
tcggacgatcctcccatgtacatgagacccaagtacaaggaccgcagccccttcaccctc
ctggcctccagccgcttccgcaaccacctcctccactccctgtcgctctccgggaagatg
ctgcgcagcaccagtgaccccaagggcaccaccagggaccacggaggagggatggaaggg
gaacaggggcgcaaacgcaccgtcactgaacccagctacacctttggatcttcagatgtc
ttcccaatctataatgacggccacctgcccaaaagcccctctgccaacctagaaacttcc
attgtgggcagcaaggcctctgagaaccaggacagcacccccagctttggggagggcgag
gaagatggggagggggaggggaggctgccaggccggtcagtgggggtaggagggtcaggg
gtgggggagaaccagagagagcagactagccgggaacgcctggccggggatggcccgtcc
ggtgggggcgggggagctccgtttaaatcgcgcagtcagagcttcaacacggacacgacc
accagcggcatcagctctatgagctccagcccctccagggagaccctgccctccaccatc
gacacggacggtgtcagcctcaacagtgtgatcagcgctaagaccatccagaccctgacc
tccctcacgccccagccccacaccacccacctctcctccctgtccaagtccagctctgcc
tccctggtgccccccggctcctcccacaccctcccccgccgcgcccagtcaatcaagtcg
ccctcattgaccaccctgagcggcctgacagactgcagcctcatgtactccaactcccgc
gacgcgctgggctacgccactctgaagtacgccacttcctgtgacacgtacgccagtcag
cgtgatgcactgggatacgctactctgaagaggctgcagcagcagaggatccactcgtcc
ctgtcccacagcgaggctctggcctccccagccaaagacgtgctcttcactgataccatc
accatgaagactggcagcctggactccagactcaccccacggtggttcctgaaggctctg
agttttgcctccctggacaaggaggatctgctgagccccatcagccagagcactctgcag
cggtgctcctcagtgagatccatgctgtccagcgccacctacggcagctctgatgacttc
atcggcctggcgctgcctgtggacatcaacaacatgttccagataaaagaaacaccatat
ttccagaagaggaccagcccgccctctgaggacagatctgccaaattcttctctggagac
tcagatggccccagccctcactcccggcatgctgtgcttcgctcccagctgagcatcacc
gagctgatgggggtgagccgggcggagcagcagaagctgctgggatcagaggagactggt
ctacaggaacacaacgatgacaactgtctctactgcaccgggctttctgtgctcggcttc
agcgcttccaacagcagcccagacttgacggaggaaccccctttctcagagtggtgcgat
ccgcctgtgcagaaccacctggaggtcatgggccaaaccaaactgtcaggagtgtccggg
tgcagtgatgctgtgtcccagggctccccaggaagcatccgcagcactgaactggttttg
ggagtgaagtccatcccagaggaatctccggccggcagggttctcctcaggaaggaggtc
ctgcgtctcgtggtcaacctcagctcctctgtggggaccaaaggccatgagacgaacctg
ctaacgatcaaggagaagttcccctatgcattcgatgacatctgtctctactctgaggtg
tcttacctgctggcccactgcatgttccgtctgtccgcacgccgcttcatccaggagctc
ttccaagacgtgccattcattccgatgtacgaagaggcagagagcatcctctccaagctg
ccaaagaacggaccagccgaccctccacctgagccctga
DBGET
integrated database retrieval system
