Coregonus clupeaformis (lake whitefish): 121573908
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Entry
121573908 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121573908
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121573908
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121573908
04121 Ubiquitin system [BR:
cclu04121
]
121573908
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121573908
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121573908
Membrane trafficking [BR:
cclu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121573908
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121573908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
121573908
NCBI-ProteinID:
XP_041742247
LinkDB
All DBs
Position
18:51966377..51975275
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AA seq
503 aa
AA seq
DB search
MPWCRPATSEKLIREFLYSGSIVRNKIMKNWGVIGGIAAAMAAGVYVLWGPITDSKKRKK
GMVPGLLNLGNTCFMNSLLQGLAACPSFVKWLEELTSRKGVSDGEPEKDPKLSRTLLQLL
KALSNDPGEEDVLNAGCLLEVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVTH
LFDIQSLESLPDIDEKTLSCKSRGPLHPIRSPWKFPHPFHGRLTSNMACKRCEQQSPVRY
DSFDSLSLSIPSPQWGQPVSLDHCLQHFISSETIKEVECENCTKLQQGALVNGHVLESQR
TTFIKQLKLGKLPQCLCIHLQRLTWSNEGMPIKRQEHVQISEYLSMDRYKHRATIQRLQH
INCTPKTIKAEDSREAADKTTPNGKDVEHHNNNKPLSNGTCLSVFLHSPGLNPQVNLTYD
YSSSEYLFQLMAVLVHHGDMHSGHFVTYRRCPPSPRSSSPFSSQWLWVSDDSVRKASLQE
VLSSNAYLLFYERVRRLRLLLEE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggtgcagaccagcgacatctgaaaagcttattcgggagttcctgtactctgga
tccattgtcaggaacaaaattatgaaaaactggggagtcattggtggaatagcggctgcc
atggctgctggagtatatgttctatggggtccaattacagacagcaagaaaaggaagaaa
ggcatggtaccaggcctgctgaacctgggaaacacctgcttcatgaactctctgctccag
ggcctggcagcctgcccttcctttgtcaagtggctggaggagttaactagccgcaaaggt
gtgtcagatggtgagccagagaaggaccctaaactttccagaactctcctgcagcttctc
aaagcactgtcaaacgaccctggggaggaggatgtgctgaatgcagggtgtctgctggag
gtcctcagactctacaggtggcacatcagttcctttgaggaacaggatgcccatgagctc
ttccatgtcctcacctcttccctggaggaggagcgagaccgacagcccaaagtcacccac
ctctttgacattcagtcccttgagagtctcccagatatagatgagaagaccttgagctgc
aagagtcgaggccctcttcatcctatacgaagtccttggaagtttccacatcctttccat
ggccgcctaacaagcaacatggcatgcaagcgttgcgaacaacagagtccagtgcgatat
gactctttcgacagcctctccttatccatcccttcgccgcaatggggccagcctgtctct
ctggatcactgtctccagcatttcatctcttcagagaccattaaagaggtggagtgtgaa
aactgcaccaagcttcaacaaggagccttagtgaatgggcatgtcctcgaaagccagagg
acaaccttcatcaaacagcttaaactgggaaagctcccccagtgtctctgtattcacctg
cagagactgacgtggtctaatgagggtatgcccataaagagacaggaacatgtccagatc
tcagagtacctgtctatggaccgctacaaacaccgcgcaaccattcagaggctccagcac
atcaactgtactcccaaaaccattaaagcagaggactcaagagaggctgcagataagacc
actcccaatggcaaagatgtagaacaccataacaacaacaagcctctgtccaatggaaca
tgtttgtctgtctttctccattctcctgggttgaacccacaggtcaacctcacatatgac
tacagctcctcagaatacctatttcaactgatggctgtgttggttcaccatggtgacatg
cactcaggacactttgtcacgtaccgccgctgccctccctcgccccgcagctcctctcca
ttcagctcccagtggctgtgggtttcagatgactccgtacgcaaggccagtttgcaggag
gtgctgtcatccaatgcctacctactcttctatgagcgggtgagacggctccgtctactg
ttggaggagtag
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