Coregonus clupeaformis (lake whitefish): 121573944
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Entry
121573944 CDS
T08357
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121573944
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
ROBO family
121573944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
121573944
NCBI-ProteinID:
XP_041742292
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MQVGMCLLWATWLYTWAEGSRQCQCQCTCLPEPGLAEGSKTQVKDHKEHVRHRLKHRQHQ
PHRDRPHWRKGSRLRAEVVEVPPLIVHHPSDVVVKVGSPATLSCRADGTPEPSIEWLRNG
QPLEMDKLDSQSRPIVLSEGSLFFLSVVPGRRSQSHEGVYACVAKNSAGKATSRNASLYI
AALREEFRVQPSDVEVAVGEVAVMNCSPPVGHPEPNVTWRKDGVPINDTDPHYTALNGKL
IIAPAQKNDSGVYICVASNTVGVRESRAARLSVLAKPVLVLKPQDVSVGMGESAQFNCEA
KGDPMPAVEWSREQGLLPNGRYLVNPDQSLQIHYVTSLDSGRYTCTAVNDVGVVTASAQL
QVEEAASTRQRDLHRELSVLRVALENVTLLTPNSNMSQVQWKLQSFPTQPHYLDGFEVLY
RSLLPAISDWAAKRVVLPNFQTLVGPLKRGYKYEFKVRPYGSSLYGRESNTRCLGVPETV
PSAPPQAISITMTPDHNDTVHVTWKPPPHEAHNGIIQGYQVWCVQSEEQQYLNWTVDSGT
HSLEITPLYPGKQYWVRVATVNGAGVGVQSDPHRVVIDSQRSGAPQSDSPSRVLNQVLAV
LRGQVFIGTVGALLWCILVVTAVCLYRRHTRPGDHLGQCHIKAKGLYRLASEDLIIKHRM
AAPDSPWISGVWRPAQSDEKYQGLWAQSQENPGFRKTMLPITAKKDPGSLDAAVPIVPDN
CGVYGAFYVDLMGNSLKTFNSPARCPKRPHCHTSSSSQHGAETVRISQPTTVVKTTLVQD
GQALPWKQALPSQPKMGVLKESWENNYKRDCHAVSSAPLVSSRSQALAVRGVPYEQRLSH
LTPGGHSECFKPLASPRFLHYSASLHLVDMLPPLPIDDTADTHSLTSEEGSSRSTKLTVD
VRSLQSVCAASGHRGPPTNTNTNTTGCPSYSCLSTASYCMSLDEEQDATMTSQDVTQYLE
RSPKAEKHITTLENPPASSLSRPFTPTPTLGYINGPLPSDQLEDGMTDEQEPMGFRRARF
QSTPSSLCSEWEGSLLNGWGSVSEGNMANSTRTSLSSSDVSFMNDANFARVLATVAAESM
SGASFSDFSPPASPLSALFPPARGEGGDCFGELDPMPIWDWSTAWVEEMEAQYRAQYPSQ
AAATPACDTWGRCRDDLHHDNRRATEGSRGK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttggaatgtgtctgctctgggcgacctggctctatacctgggcggaagggtca
cgccagtgtcagtgccaatgcacctgtctacctgagccgggattggccgaggggtcaaag
acacaggtgaaggatcataaggagcatgtccgtcatcgtttgaagcaccggcagcatcag
cctcatagggacaggccacactggagaaaaggttccaggctgagggcggaggtggtggag
gtgcccccgctgatcgtccaccacccctcagacgtggtggtcaaggtaggcagccccgct
actctctcatgccgtgccgacggcacacccgagccctccatcgagtggctccgtaatggc
cagcccctggagatggacaagctggacagccaatcgcggcccatcgttctgtcggagggc
agcctgttcttcctcagcgtggtccctgggaggcggagtcagtcacatgagggtgtgtac
gcgtgcgtggcaaagaacagcgcaggcaaggccaccagccgcaatgcctctctctatatc
gcagctctgcgtgaggaattccgggtgcagcccagtgacgtggaggtggctgttggggag
gtggcggtgatgaactgcagcccgccggtgggacaccccgagcccaacgtcacctggagg
aaagacggggtccctatcaacgacaccgacccgcattacactgcactgaatgggaagttg
atcattgccccagcccagaagaatgactctggcgtgtacatctgtgtggcttccaacact
gtgggtgtaagagagagcagggccgcccgcctgtctgtcctagccaagccagtgttggtg
ctaaagcctcaggatgtgtcggtggggatgggggagtctgcccagttcaactgtgaggct
aaaggagatcccatgcctgctgtcgagtggagccgcgagcagggccttctgcccaatggc
aggtatctagtgaatcctgaccagagcctccaaatccactatgtgacatcactggattct
gggaggtacacctgcacagctgtcaacgacgtgggggtagtcactgctagtgcacagcta
caggtggaggaagccgcaagtaccagacagagggaccttcacagagagttgtcggtcctg
cgtgtggctctggagaatgtgacgttgctgactccaaactccaacatgtcccaagtgcag
tggaagctccagtctttcccaacccagcctcactacctggatggtttcgaggtcctctac
cgctctctcctgcctgccatttcggactgggctgctaagagggttgtactacccaacttc
caaacactggtcggcccgctcaagaggggctacaagtatgagttcaaagtgcgtccctat
ggcagcagcctgtacggccgggagagcaataccaggtgtctaggtgtacctgagacagtg
cctagtgccccacctcaggccatctccataacgatgacccctgaccacaatgacacggtc
catgtgacctggaagcctcccccccatgaagctcacaacggcatcatccagggataccag
gtgtggtgtgtgcagtcggaagagcagcagtacctgaactggacagtggacagtgggacc
cacagtctggaaataacccctctgtacccagggaaacagtactgggtccgggtggcaacg
gtcaacggagctggcgtcggtgtgcagagtgacccccatagagtggtcatagactctcag
aggtccggagccccccagtcggacagccccagtcgggtcctcaatcaggtcctggccgtg
ctgaggggccaggtgttcattgggaccgttggcgccctcctgtggtgcatcctggtggtg
acggccgtctgcctgtatcgccgccacacccggcctggcgaccacctgggacaatgccat
atcaaggctaaaggtttgtacaggttggccagtgaggacctcatcataaaacacagaatg
gcagccccagactctccgtggatctcgggtgtgtggagaccggcccagagtgacgagaag
taccagggactgtgggctcagagccaggagaaccccggcttcaggaagaccatgttgccc
atcacagccaagaaggaccccggctctctggacgcggctgtccccattgtgcccgacaac
tgcggtgtctacggggcgttttacgtggacctgatgggtaacagcctcaagaccttcaac
agccctgcccgatgccccaagcggccccactgccacacctcctcctcctcgcagcacggc
gcagagacggtgcgcatctcccagcccaccacagttgtcaagaccacgctggtccaggat
ggccaggcattgccatggaaacaggccttgccctcgcagcccaagatgggcgtgctcaag
gagtcgtgggaaaataattacaagcgagattgccatgcggtgagcagcgcccccttggtg
tcgtccaggagccaggcgctggctgtgaggggagtgccttacgaacagaggctcagccac
ctcacaccaggtgggcactctgagtgcttcaagcccctggcgtcgccccgcttcctgcac
tactctgcctcactgcacctggtagacatgctgccccctctgcccatagacgacaccgct
gacacacacagcctcacctcagaggaagggtccagcaggtccactaagctgacagtagat
gtcaggtctctccagtctgtgtgtgctgcgtctggtcaccgtggcccccccaccaacact
aacaccaacaccactggctgcccctcctacagctgcctgtccactgcctcctactgcatg
tcattggacgaggaacaggacgcaacgatgacctcacaggatgtcacccagtacctggag
cgcagccccaaggccgagaaacacatcaccacgttggagaatcctcccgcctcctccctg
tcccgtccctttactcccactcccaccctgggctatatcaatgggcccctcccctccgac
caactggaggacgggatgactgacgaacaggagccaatgggcttccgacgggcccggttt
cagagcacgccctcgtcgctctgcagcgaatgggagggttcgctgttgaacggctggggc
tcggtgtcagagggcaacatggcgaacagcacccgcaccagcctcagctcgtcggatgtc
tcattcatgaacgacgccaactttgcccgggtgcttgccacagtggccgccgagtccatg
agtggagcctccttctcagacttctctcccccggcgtcgcccctcagtgccctgttccct
ccagctcgaggggaaggaggggactgtttcggggagctggaccccatgcccatttgggac
tggagcacagcttgggtggaggagatggaggcgcagtaccgtgcccagtacccctcccag
gcagcagcaacccccgcatgcgacacctgggggcgttgccgtgatgaccttcaccatgac
aaccgccgagccaccgaagggagtaggggcaaatga
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